Detailed information NTG0759775

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OSH14_RS07980
• Genome accession: NZ_CP113071
• Coordinates: 1693630..1694331 (+)
• Length: 233 a.a.
• NCBI ID: WP_032025534.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain A118 DeltaH0N27_10830::kan
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1688630..1699331

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSH14_RS07945 (OSH14_07945)	kdsB	1689153..1689914 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OSH14_RS07950 (OSH14_07950)	-	1689926..1690906 (+)	981	WP_004747384.1	DNA polymerase III, delta' subunit	-
OSH14_RS07955 (OSH14_07955)	-	1690918..1691259 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
OSH14_RS07960 (OSH14_07960)	-	1691277..1692050 (+)	774	WP_000497302.1	TatD family hydrolase	-
OSH14_RS07965 (OSH14_07965)	-	1692088..1692696 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
OSH14_RS07970 (OSH14_07970)	-	1692706..1693260 (+)	555	WP_000841371.1	type II secretion system protein	-
OSH14_RS07975 (OSH14_07975)	xcpV	1693250..1693630 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
OSH14_RS07980 (OSH14_07980)	xcpW	1693630..1694331 (+)	702	WP_032025534.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OSH14_RS07985 (OSH14_07985)	gspK	1694331..1695290 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
OSH14_RS07990 (OSH14_07990)	-	1695520..1696116 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
OSH14_RS07995 (OSH14_07995)	ung	1696167..1696880 (+)	714	WP_001177530.1	uracil-DNA glycosylase	-
OSH14_RS08000 (OSH14_08000)	-	1696877..1698001 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
OSH14_RS08005 (OSH14_08005)	tadA	1698008..1698511 (+)	504	WP_031946509.1	tRNA adenosine(34) deaminase TadA	-
OSH14_RS08010 (OSH14_08010)	-	1698581..1699024 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26656.61 Da
• Isoelectric Point: 9.5501

>NTDB_id=759775 OSH14_RS07980 WP_032025534.1 1693630..1694331(+) (xcpW) [Acinetobacter baumannii strain A118 DeltaH0N27_10830::kan]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=759775 OSH14_RS07980 WP_032025534.1 1693630..1694331(+) (xcpW) [Acinetobacter baumannii strain A118 DeltaH0N27_10830::kan]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTACATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991