Detailed information NTG0075386

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: OCX48_RS08475
• Genome accession: NZ_AP024736
• Coordinates: 1727262..1728536 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 59709
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1722262..1733536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCX48_RS08445	mnmA	1722464..1723582 (-)	1119	WP_000066094.1	tRNA 2-thiouridine(34) synthase MnmA	-
OCX48_RS08450	-	1723583..1724725 (-)	1143	WP_000409158.1	cysteine desulfurase family protein	-
OCX48_RS08455	-	1725037..1726050 (+)	1014	WP_000985895.1	LLM class flavin-dependent oxidoreductase	-
OCX48_RS08460	-	1726287..1726433 (-)	147	WP_000009238.1	SAS049 family protein	-
OCX48_RS08465	-	1726473..1726655 (-)	183	WP_000752909.1	CsbD family protein	-
OCX48_RS08470	cymR	1726755..1727177 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
OCX48_RS08475	rarA	1727262..1728536 (+)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
OCX48_RS08480	-	1728697..1729470 (-)	774	WP_000682646.1	ThiF family adenylyltransferase	-
OCX48_RS08485	-	1729470..1729598 (-)	129	WP_001790559.1	hypothetical protein	-
OCX48_RS08495	aspS	1729931..1731697 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
OCX48_RS08500	hisS	1731713..1732975 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=75386 OCX48_RS08475 WP_000102740.1 1727262..1728536(+) (rarA) [Staphylococcus aureus strain 59709]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=75386 OCX48_RS08475 WP_000102740.1 1727262..1728536(+) (rarA) [Staphylococcus aureus strain 59709]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686