Detailed information NTG0753678

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: OM992_RS13805
• Genome accession: NZ_CP110268
• Coordinates: 2682497..2684875 (-)
• Length: 792 a.a.
• NCBI ID: WP_049627096.1
• Uniprot ID: A0AAE2NYB7
• Organism: Bacillus siamensis strain YB-1631
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2677497..2689875

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OM992_RS13770 (OM992_13770)	-	2678569..2679297 (+)	729	WP_045926791.1	amino acid ABC transporter ATP-binding protein	-
OM992_RS13775 (OM992_13775)	-	2679318..2680145 (+)	828	WP_264818884.1	transporter substrate-binding domain-containing protein	-
OM992_RS13780 (OM992_13780)	-	2680202..2680852 (+)	651	WP_099744688.1	amino acid ABC transporter permease	-
OM992_RS13785 (OM992_13785)	-	2680871..2681527 (+)	657	WP_016938827.1	amino acid ABC transporter permease	-
OM992_RS13790 (OM992_13790)	-	2681563..2681694 (-)	132	WP_003152741.1	YrzQ family protein	-
OM992_RS13795 (OM992_13795)	-	2681716..2681907 (-)	192	WP_003152738.1	hypothetical protein	-
OM992_RS13800 (OM992_13800)	-	2681920..2682378 (-)	459	WP_264818885.1	hypothetical protein	-
OM992_RS13805 (OM992_13805)	recD2	2682497..2684875 (-)	2379	WP_049627096.1	ATP-dependent RecD-like DNA helicase	Machinery gene
OM992_RS13810 (OM992_13810)	-	2684894..2685514 (-)	621	WP_406795077.1	tetratricopeptide repeat protein	-
OM992_RS13815 (OM992_13815)	mnmA	2685602..2686717 (-)	1116	WP_016938823.1	tRNA 2-thiouridine(34) synthase MnmA	-
OM992_RS13820 (OM992_13820)	-	2686754..2687893 (-)	1140	WP_264818888.1	cysteine desulfurase family protein	-
OM992_RS13825 (OM992_13825)	cymR	2687913..2688329 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
OM992_RS13830 (OM992_13830)	-	2688524..2689789 (+)	1266	WP_264818889.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88259.91 Da
• Isoelectric Point: 4.9490

>NTDB_id=753678 OM992_RS13805 WP_049627096.1 2682497..2684875(-) (recD2) [Bacillus siamensis strain YB-1631]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILADASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERVKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSKDIQVLAPMYRGKAGINELNVLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=753678 OM992_RS13805 WP_049627096.1 2682497..2684875(-) (recD2) [Bacillus siamensis strain YB-1631]
GTGGATCAGCTGAACATCGAAGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTACCACAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACTTACACATTTTACGGAAAAACCGCCACACACCCCAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCATTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGGCTGATGCATCGGTGCTTT
ATGATGTGCCGAAAATGTCAAAAAAGAAAGCGGACAAACTGGCGGGAGAGCTGCAGCGGCATCAGGGGCTGGAGCAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCCCAGCTATCCATGAAAATTTATCAGGCTTACGAAACGGAAACCCTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGACGTGGAAGGCATCGGTTTTGTGAAAGCCGACGAGCTGGGCGGGA
AAATGGGGCTGTCAGGAAACCACCCGGAGCGGGTCAAAGCGGCTATCTTATATACGATTGAATCAACGTGTCTTTCAGAA
GGTCATACGTACATAGAGACAAAGCAGCTGATTATCAATACGCAAACGCTTCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAAATGGATGCAGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGACATCGTCATAGAAGGAGAACGCTGCTATT
TTCCGTCCTTGTTTTACGCGGAACAAAACGTCGCAAAACGCGTGCTCGACATTGCGGCCCAGACGGAGTATGCCGATCAG
TTTCCTGAATCGGAATTTCTTCTTGCGCTCGGTGAACTGGAAGAACGGATGAACGTTCAATACGCTCCGAGTCAAAAGGA
TGCGATTCAAAAAGCGCTGTCCTCGCCGATGCTTTTACTGACCGGGGGACCGGGCACGGGAAAAACGACCGTTATCAAAG
GCATCGTGGAATTGTACAGTGAACTGCACGGAGTATCGCTTGACCCTGGTGATTATAAAAAAGATGAAGCATTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAGCGAATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTCGGCTGGAATGGCGCTGAAGGCTTTACCTACAATGAAGATCAGCCGATTGAAGGGAAACTGATTATTATAGACGAAG
CGAGTATGCTCGATATTTGGCTCGCCAGCCATTTGTTTAAGGCGCTCCCTAAGCACATTCAGCTTATCGTCGTCGGTGAT
GAAGACCAGCTTCCTTCCGTAGGGCCCGGGCAGGTGCTGAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTGCGTCT
GACAGATATTTACCGTCAGGCGGAAGGGTCATCCATCGTTGAACTTGCGCATGATATGAAAAAGGGACTGCTTCCCAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCGTTTATCCGCTGTAATTCTTCACAAATTAAAGAAGTCGTGGATCAAGTCGTC
TCGAATGCGCTAAAAAAGGGGTATACTTCCAAAGACATTCAAGTGCTCGCGCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAACTGAACGTGCTTCTTCAAGACATTATGAATCCGCCGAAAGAAAAAAGGCGGGAACTGAAATTCGGAGATGTCGTCT
ACAGGACGGGCGATAAAATATTACAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGAGATATCGGCGAAATCGTG
TCTATCTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTATCGTTTGACGGGAACGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCATGCTTACTGCTGTTCTATTCATAAGTCGCAGGGCAGCGAATTTCCCATTGTCG
TCCTGCCTGTCGTCAAAGGCTATTATCGAATGCTCAGGAGAAATCTCCTTTATACCGCGATTACAAGAGCCAAAAAATTT
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCACTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAATTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTATATG
ATGCGAATATTGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• AAA domain (AAA_30) (341-548)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	89.381	99.874	0.893