Detailed information NTG0075298

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: OCX19_RS08560
• Genome accession: NZ_AP024734
• Coordinates: 1742755..1744029 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 59691
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1737755..1749029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCX19_RS08530	mnmA	1737957..1739075 (-)	1119	WP_000066094.1	tRNA 2-thiouridine(34) synthase MnmA	-
OCX19_RS08535	-	1739076..1740218 (-)	1143	WP_000409158.1	cysteine desulfurase family protein	-
OCX19_RS08540	-	1740530..1741543 (+)	1014	WP_000985895.1	LLM class flavin-dependent oxidoreductase	-
OCX19_RS08545	-	1741780..1741926 (-)	147	WP_000009238.1	SAS049 family protein	-
OCX19_RS08550	-	1741966..1742148 (-)	183	WP_000752909.1	CsbD family protein	-
OCX19_RS08555	cymR	1742248..1742670 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
OCX19_RS08560	rarA	1742755..1744029 (+)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
OCX19_RS08565	-	1744190..1744963 (-)	774	WP_000682646.1	ThiF family adenylyltransferase	-
OCX19_RS08570	-	1744963..1745091 (-)	129	WP_001790559.1	hypothetical protein	-
OCX19_RS08580	aspS	1745424..1747190 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
OCX19_RS08585	hisS	1747206..1748468 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=75298 OCX19_RS08560 WP_000102740.1 1742755..1744029(+) (rarA) [Staphylococcus aureus strain 59691]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=75298 OCX19_RS08560 WP_000102740.1 1742755..1744029(+) (rarA) [Staphylococcus aureus strain 59691]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCTGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686