Detailed information NTG0075212

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: OCX17_RS08185
• Genome accession: NZ_AP024732
• Coordinates: 1686487..1687761 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 59621
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1681487..1692761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCX17_RS08155	mnmA	1681689..1682807 (-)	1119	WP_000066094.1	tRNA 2-thiouridine(34) synthase MnmA	-
OCX17_RS08160	-	1682808..1683950 (-)	1143	WP_000409158.1	cysteine desulfurase family protein	-
OCX17_RS08165	-	1684262..1685275 (+)	1014	WP_000985895.1	LLM class flavin-dependent oxidoreductase	-
OCX17_RS08170	-	1685512..1685658 (-)	147	WP_000009238.1	SAS049 family protein	-
OCX17_RS08175	-	1685698..1685880 (-)	183	WP_000752909.1	CsbD family protein	-
OCX17_RS08180	cymR	1685980..1686402 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
OCX17_RS08185	rarA	1686487..1687761 (+)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
OCX17_RS08190	-	1687922..1688695 (-)	774	WP_000682646.1	ThiF family adenylyltransferase	-
OCX17_RS08195	-	1688695..1688823 (-)	129	WP_001790559.1	hypothetical protein	-
OCX17_RS08205	aspS	1689156..1690922 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
OCX17_RS08210	hisS	1690938..1692200 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=75212 OCX17_RS08185 WP_000102740.1 1686487..1687761(+) (rarA) [Staphylococcus aureus strain 59621]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=75212 OCX17_RS08185 WP_000102740.1 1686487..1687761(+) (rarA) [Staphylococcus aureus strain 59621]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686