Detailed information NTG0074952

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: OCX11_RS08435
• Genome accession: NZ_AP024726
• Coordinates: 1717407..1718681 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 59482
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1712407..1723681

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCX11_RS08405	mnmA	1712609..1713727 (-)	1119	WP_000066094.1	tRNA 2-thiouridine(34) synthase MnmA	-
OCX11_RS08410	-	1713728..1714870 (-)	1143	WP_000409158.1	cysteine desulfurase family protein	-
OCX11_RS08415	-	1715182..1716195 (+)	1014	WP_000985895.1	LLM class flavin-dependent oxidoreductase	-
OCX11_RS08420	-	1716432..1716578 (-)	147	WP_000009238.1	SAS049 family protein	-
OCX11_RS08425	-	1716618..1716800 (-)	183	WP_000752909.1	CsbD family protein	-
OCX11_RS08430	cymR	1716900..1717322 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
OCX11_RS08435	rarA	1717407..1718681 (+)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
OCX11_RS08440	-	1718842..1719615 (-)	774	WP_000682646.1	ThiF family adenylyltransferase	-
OCX11_RS08445	-	1719615..1719743 (-)	129	WP_001790559.1	hypothetical protein	-
OCX11_RS08455	aspS	1720076..1721842 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
OCX11_RS08460	hisS	1721858..1723120 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=74952 OCX11_RS08435 WP_000102740.1 1717407..1718681(+) (rarA) [Staphylococcus aureus strain 59482]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=74952 OCX11_RS08435 WP_000102740.1 1717407..1718681(+) (rarA) [Staphylococcus aureus strain 59482]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686