Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QAO39_RS03975 Genome accession   NZ_CP123158
Coordinates   764087..764827 (+) Length   246 a.a.
NCBI ID   WP_000216873.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BE-MSSA9     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 759087..769827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO39_RS03950 (QAO39_03950) yhaM 759505..760446 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  QAO39_RS03955 (QAO39_03955) - 760567..761529 (-) 963 WP_000782127.1 foldase protein PrsA -
  QAO39_RS03960 (QAO39_03960) - 761734..762291 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  QAO39_RS03965 (QAO39_03965) - 763024..763389 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  QAO39_RS03970 (QAO39_03970) - 763531..763953 (-) 423 WP_000004981.1 HIT family protein -
  QAO39_RS03975 (QAO39_03975) pptA 764087..764827 (+) 741 WP_000216873.1 ABC transporter ATP-binding protein EcsA Regulator
  QAO39_RS03980 (QAO39_03980) ecsB 764820..766043 (+) 1224 WP_165468797.1 ABC transporter permease EcsB -
  QAO39_RS03985 (QAO39_03985) traP 766167..766670 (-) 504 WP_000737976.1 signal transduction protein TRAP -
  QAO39_RS03990 (QAO39_03990) - 766833..766943 (+) 111 WP_165468796.1 hypothetical protein -
  QAO39_RS03995 (QAO39_03995) hemE 766933..767970 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  QAO39_RS04000 (QAO39_04000) hemH 768028..768951 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27701.09 Da        Isoelectric Point: 4.7455

>NTDB_id=748739 QAO39_RS03975 WP_000216873.1 764087..764827(+) (pptA) [Staphylococcus aureus strain BE-MSSA9]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHKQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=748739 QAO39_RS03975 WP_000216873.1 764087..764827(+) (pptA) [Staphylococcus aureus strain BE-MSSA9]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAAACAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545