Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | KUH140013_RS14210 | Genome accession | NZ_AP020324 |
| Coordinates | 2793897..2794292 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain KUN1163 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2788897..2799292
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KUH140013_RS14180 (KUN1163_2641) | - | 2790155..2790559 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| KUH140013_RS14185 | - | 2790897..2790989 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| KUH140013_RS14190 (KUN1163_2642) | - | 2791121..2791354 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| KUH140013_RS14195 (KUN1163_2643) | murA | 2791465..2792730 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| KUH140013_RS14200 (KUN1163_2644) | fabZ | 2792764..2793204 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| KUH140013_RS14205 (KUN1163_2645) | - | 2793263..2793703 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| KUH140013_RS14210 (KUN1163_2646) | ssb | 2793897..2794292 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| KUH140013_RS14215 (KUN1163_2647) | sceD | 2794681..2795376 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| KUH140013_RS14220 (KUN1163_2648) | tenA | 2795763..2796452 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| KUH140013_RS14225 (KUN1163_2649) | thiD | 2796445..2797275 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| KUH140013_RS14230 (KUN1163_2650) | thiM | 2797259..2798050 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| KUH140013_RS14235 (KUN1163_2651) | thiE | 2798052..2798693 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=74868 KUH140013_RS14210 WP_000932694.1 2793897..2794292(+) (ssb) [Staphylococcus aureus strain KUN1163]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=74868 KUH140013_RS14210 WP_000932694.1 2793897..2794292(+) (ssb) [Staphylococcus aureus strain KUN1163]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |