Detailed information NTG0741546

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OIO62_RS10220
• Genome accession: NZ_CP107616
• Coordinates: 2159651..2160352 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain 1326932
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2154651..2165352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIO62_RS10190 (OIO62_10190)	-	2154958..2155401 (-)	444	WP_001246675.1	SRPBCC family protein	-
OIO62_RS10195 (OIO62_10195)	tadA	2155471..2155974 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
OIO62_RS10200 (OIO62_10200)	-	2155981..2157105 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
OIO62_RS10205 (OIO62_10205)	ung	2157102..2157815 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
OIO62_RS10210 (OIO62_10210)	-	2157866..2158462 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
OIO62_RS10215 (OIO62_10215)	gspK	2158692..2159651 (-)	960	WP_000301460.1	type II secretion system minor pseudopilin GspK	-
OIO62_RS10220 (OIO62_10220)	xcpW	2159651..2160352 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OIO62_RS10225 (OIO62_10225)	xcpV	2160352..2160732 (-)	381	WP_000836907.1	type II secretion system minor pseudopilin GspI	Machinery gene
OIO62_RS10230 (OIO62_10230)	-	2160722..2161276 (-)	555	WP_000841373.1	type II secretion system protein	-
OIO62_RS10235 (OIO62_10235)	-	2161286..2161894 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
OIO62_RS10240 (OIO62_10240)	-	2161932..2162705 (-)	774	WP_000497298.1	TatD family hydrolase	-
OIO62_RS10245 (OIO62_10245)	-	2162723..2163064 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
OIO62_RS10250 (OIO62_10250)	-	2163076..2164056 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
OIO62_RS10255 (OIO62_10255)	kdsB	2164068..2164829 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=741546 OIO62_RS10220 WP_000594572.1 2159651..2160352(-) (xcpW) [Acinetobacter baumannii strain 1326932]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=741546 OIO62_RS10220 WP_000594572.1 2159651..2160352(-) (xcpW) [Acinetobacter baumannii strain 1326932]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991