Detailed information NTG0741096

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OIO74_RS10235
• Genome accession: NZ_CP107593
• Coordinates: 2157699..2158400 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain 1326580
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2152699..2163400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIO74_RS10205 (OIO74_10205)	-	2153006..2153449 (-)	444	WP_001246675.1	SRPBCC family protein	-
OIO74_RS10210 (OIO74_10210)	tadA	2153519..2154022 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
OIO74_RS10215 (OIO74_10215)	-	2154029..2155153 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
OIO74_RS10220 (OIO74_10220)	ung	2155150..2155863 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
OIO74_RS10225 (OIO74_10225)	-	2155914..2156510 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
OIO74_RS10230 (OIO74_10230)	gspK	2156740..2157699 (-)	960	WP_000301460.1	type II secretion system minor pseudopilin GspK	-
OIO74_RS10235 (OIO74_10235)	xcpW	2157699..2158400 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OIO74_RS10240 (OIO74_10240)	xcpV	2158400..2158780 (-)	381	WP_000836907.1	type II secretion system minor pseudopilin GspI	Machinery gene
OIO74_RS10245 (OIO74_10245)	-	2158770..2159324 (-)	555	WP_000841373.1	type II secretion system protein	-
OIO74_RS10250 (OIO74_10250)	-	2159334..2159942 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
OIO74_RS10255 (OIO74_10255)	-	2159980..2160753 (-)	774	WP_000497298.1	TatD family hydrolase	-
OIO74_RS10260 (OIO74_10260)	-	2160771..2161112 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
OIO74_RS10265 (OIO74_10265)	-	2161124..2162104 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
OIO74_RS10270 (OIO74_10270)	kdsB	2162116..2162877 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=741096 OIO74_RS10235 WP_000594572.1 2157699..2158400(-) (xcpW) [Acinetobacter baumannii strain 1326580]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=741096 OIO74_RS10235 WP_000594572.1 2157699..2158400(-) (xcpW) [Acinetobacter baumannii strain 1326580]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991