Detailed information NTG0739340

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OFU58_RS10525
• Genome accession: NZ_CP107289
• Coordinates: 2165935..2166750 (-)
• Length: 271 a.a.
• NCBI ID: WP_064784082.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain BM4623
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2160935..2171750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OFU58_RS10495 (OFU58_10495)	-	2161243..2161683 (-)	441	WP_014206600.1	SRPBCC family protein	-
OFU58_RS10500 (OFU58_10500)	tadA	2161754..2162257 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
OFU58_RS10505 (OFU58_10505)	hibch	2162263..2163387 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
OFU58_RS10510 (OFU58_10510)	ung	2163384..2164097 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
OFU58_RS10515 (OFU58_10515)	-	2164151..2164747 (-)	597	WP_280584809.1	6-carboxytetrahydropterin synthase	-
OFU58_RS10520 (OFU58_10520)	gspK	2164975..2165934 (-)	960	WP_280584810.1	type II secretion system minor pseudopilin GspK	-
OFU58_RS10525 (OFU58_10525)	xcpW	2165935..2166750 (-)	816	WP_064784082.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OFU58_RS10530 (OFU58_10530)	xcpV	2166750..2167130 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
OFU58_RS10535 (OFU58_10535)	-	2167120..2167674 (-)	555	WP_068527582.1	type II secretion system protein	-
OFU58_RS10540 (OFU58_10540)	-	2167681..2168289 (-)	609	WP_057085321.1	TetR/AcrR family transcriptional regulator	-
OFU58_RS10545 (OFU58_10545)	ycfH	2168326..2169099 (-)	774	WP_280584811.1	TatD family hydrolase	-
OFU58_RS10550 (OFU58_10550)	pilZ	2169117..2169458 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
OFU58_RS10555 (OFU58_10555)	holB	2169469..2170449 (-)	981	WP_017482275.1	DNA polymerase III subunit delta'	-
OFU58_RS10560 (OFU58_10560)	kdsB	2170463..2171224 (-)	762	WP_069035664.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30859.21 Da
• Isoelectric Point: 10.0652

>NTDB_id=739340 OFU58_RS10525 WP_064784082.1 2165935..2166750(-) (xcpW) [Acinetobacter pittii strain BM4623]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSSAQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=739340 OFU58_RS10525 WP_064784082.1 2165935..2166750(-) (xcpW) [Acinetobacter pittii strain BM4623]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCCCGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCTGAGCAAAGCTCTTCGTCTTCCGCTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGGTGGAAGGTTTTTGACTATTTATTAAAAGTTCGTGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGCCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CCCCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.444	83.026	0.734