Detailed information NTG0073905

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: K6J99_RS14685
• Genome accession: NZ_AP024623
• Coordinates: 2780935..2782200 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain BEST3102
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2775935..2787200

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J99_RS14665 (BsBEST3102_28140)	yrrB	2777306..2777926 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
K6J99_RS14670 (BsBEST3102_28150)	mnmA	2778012..2779127 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
K6J99_RS14675 (BsBEST3102_28160)	iscSA	2779158..2780297 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
K6J99_RS14680 (BsBEST3102_28170)	cymR	2780316..2780732 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
K6J99_RS14685 (BsBEST3102_28180)	rarA	2780935..2782200 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
K6J99_RS14690 (BsBEST3102_28190)	tcdA	2782242..2783006 (-)	765	WP_009967893.1	ThiF family adenylyltransferase	-
K6J99_RS14700 (BsBEST3102_28200)	aspS	2783342..2785120 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
K6J99_RS14705 (BsBEST3102_28210)	hisS	2785134..2786408 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
K6J99_RS14710 (BsBEST3102_28220)	yrzK	2786790..2786960 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=73905 K6J99_RS14685 WP_004398500.1 2780935..2782200(+) (rarA) [Bacillus subtilis strain BEST3102]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=73905 K6J99_RS14685 WP_004398500.1 2780935..2782200(+) (rarA) [Bacillus subtilis strain BEST3102]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1