Detailed information NTG0073748

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: K6K01_RS14735
• Genome accession: NZ_AP024622
• Coordinates: 2791503..2792768 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain BEST3096
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2786503..2797768

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6K01_RS14715 (BsBEST3096_28250)	yrrB	2787874..2788494 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
K6K01_RS14720 (BsBEST3096_28260)	mnmA	2788580..2789695 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
K6K01_RS14725 (BsBEST3096_28270)	iscSA	2789726..2790865 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
K6K01_RS14730 (BsBEST3096_28280)	cymR	2790884..2791300 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
K6K01_RS14735 (BsBEST3096_28290)	rarA	2791503..2792768 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
K6K01_RS14740 (BsBEST3096_28300)	tcdA	2792810..2793574 (-)	765	WP_009967893.1	ThiF family adenylyltransferase	-
K6K01_RS14750 (BsBEST3096_28310)	aspS	2793910..2795688 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
K6K01_RS14755 (BsBEST3096_28320)	hisS	2795702..2796976 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
K6K01_RS14760 (BsBEST3096_28330)	yrzK	2797358..2797528 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=73748 K6K01_RS14735 WP_004398500.1 2791503..2792768(+) (rarA) [Bacillus subtilis strain BEST3096]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=73748 K6K01_RS14735 WP_004398500.1 2791503..2792768(+) (rarA) [Bacillus subtilis strain BEST3096]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1