Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   P6F23_RS06795 Genome accession   NZ_CP120953
Coordinates   1328377..1330146 (-) Length   589 a.a.
NCBI ID   WP_286627811.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain GBSIR0001     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1323377..1335146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6F23_RS06775 (P6F23_06775) - 1323721..1325793 (+) 2073 WP_000726915.1 bifunctional metallophosphatase/5'-nucleotidase -
  P6F23_RS06780 (P6F23_06780) - 1325830..1326240 (-) 411 WP_000594940.1 peptide deformylase -
  P6F23_RS06785 (P6F23_06785) gdhA 1326310..1327659 (-) 1350 WP_000200439.1 NADP-specific glutamate dehydrogenase -
  P6F23_RS06790 (P6F23_06790) - 1327827..1328336 (+) 510 WP_000870956.1 DUF308 domain-containing protein -
  P6F23_RS06795 (P6F23_06795) rcrQ 1328377..1330146 (-) 1770 WP_286627811.1 ABC transporter ATP-binding protein Regulator
  P6F23_RS06800 (P6F23_06800) rcrP 1330151..1331890 (-) 1740 WP_000323510.1 ABC transporter ATP-binding protein Regulator
  P6F23_RS06805 (P6F23_06805) - 1331957..1332430 (-) 474 WP_000586882.1 GNAT family N-acetyltransferase -
  P6F23_RS06810 (P6F23_06810) - 1332427..1334295 (-) 1869 WP_001279326.1 ABC-F family ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 66241.78 Da        Isoelectric Point: 6.7325

>NTDB_id=735478 P6F23_RS06795 WP_286627811.1 1328377..1330146(-) (rcrQ) [Streptococcus agalactiae strain GBSIR0001]
MRKKSIFLRLWSYLTRYKATLFLAIFLKVLSSFMSILEPFILGLAITELTANLVDMAKGVSGAELNVPYIAGILIIYFFR
GVFYELGSYGSNYFMTTVVQKSIRDIRHDLNRKINKVPVSYFDKHQFGDMLGRFTSDVETVSNALQQSFLQIINAFLSII
LVVVMVLYLNVPLAMIIIACIPVTYFSAQAILKRSQPYFKEQAKILGELNGFVQEKLTGFNIIKLYGREEASSQEFRDIT
DNLRHVGFKASFISGIMMPVLNSISDFIYLIIAFVGGLQVIAGTLTIGNMQAFVQYVWQISQPVQTITQLAGVLQSAKSS
LERIFEVLDEEEEANQVTKKLSHDLTGQVSFHGVDFHYSPDKPLIRDFNLDVEPGQMIAIVGPTGAGKTTLINLLMRFYD
VSEGAITVDGHDIRHLSRQDFRQQFGMVLQDAWLYEGTIKENLRFGNLEASDEDIVAAAKAANVDHFIRTLPGGYNMVMN
QESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKKLMEGRTSFVIAHRLSTIQEADNILVLKDGQ
IIEQGNHQKLLADKGFYYELYNSQFSNSK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=735478 P6F23_RS06795 WP_286627811.1 1328377..1330146(-) (rcrQ) [Streptococcus agalactiae strain GBSIR0001]
ATGAGAAAAAAATCTATTTTTTTGAGATTATGGTCTTACCTAACTCGCTACAAAGCTACTCTTTTCTTAGCGATTTTTTT
GAAAGTTTTATCTAGTTTTATGAGTATTCTGGAGCCTTTTATTTTAGGGTTAGCGATAACAGAGTTGACTGCTAACCTTG
TTGATATGGCTAAGGGAGTTTCTGGGGCAGAATTGAACGTTCCTTATATTGCTGGTATTCTGATTATTTATTTTTTCAGA
GGTGTTTTCTATGAATTAGGTTCTTATGGCTCAAATTATTTTATGACTACTGTCGTTCAAAAAAGTATCCGTGATATCCG
TCATGATTTGAATCGTAAAATCAATAAAGTTCCTGTATCGTATTTTGATAAGCACCAATTTGGAGATATGTTGGGACGTT
TTACAAGTGATGTTGAAACGGTCTCAAATGCTTTACAACAGAGCTTTTTACAGATTATCAATGCTTTTTTAAGTATTATT
CTAGTAGTCGTTATGGTACTTTATCTAAATGTACCATTAGCCATGATTATCATTGCTTGTATTCCTGTAACTTATTTTAG
TGCACAAGCGATACTAAAAAGATCCCAACCTTACTTTAAAGAACAGGCAAAGATTCTGGGAGAACTGAATGGTTTTGTAC
AAGAGAAATTAACTGGTTTCAATATCATAAAATTATATGGTAGAGAAGAGGCGTCTAGTCAAGAATTTCGTGATATAACG
GATAATCTACGTCATGTAGGTTTCAAAGCTAGCTTCATTTCAGGAATTATGATGCCAGTATTGAATAGTATCTCTGATTT
TATTTATCTTATCATTGCATTTGTTGGCGGTTTACAAGTTATTGCTGGTACCTTAACAATTGGTAACATGCAGGCATTTG
TGCAGTATGTTTGGCAAATTAGTCAACCCGTTCAAACCATTACACAATTAGCAGGTGTTTTGCAAAGTGCAAAATCTTCC
TTAGAACGTATTTTTGAAGTCTTAGATGAAGAAGAGGAAGCCAATCAAGTCACTAAAAAATTGAGCCATGACTTAACCGG
TCAAGTCAGCTTTCATGGTGTCGATTTTCACTATTCTCCGGATAAGCCACTTATCCGCGACTTTAACTTAGATGTAGAAC
CAGGGCAAATGATTGCAATTGTAGGGCCAACAGGTGCAGGTAAGACAACACTTATAAACTTACTCATGAGATTCTACGAT
GTTAGTGAAGGTGCTATCACCGTAGATGGTCACGATATTAGACACCTATCACGCCAAGATTTCCGGCAACAATTTGGCAT
GGTGTTGCAAGATGCTTGGTTATATGAAGGTACAATAAAAGAAAATCTTAGATTCGGTAATCTTGAAGCCAGTGATGAGG
ATATAGTTGCTGCTGCCAAAGCTGCGAATGTTGACCACTTTATTCGAACGTTACCTGGTGGCTACAATATGGTGATGAAT
CAAGAATCAAGCAATATCTCCTTAGGACAAAAGCAACTGTTGACTATTGCACGTGCTTTATTAGCAGATCCTAAAATTTT
AATTTTAGATGAAGCGACTTCATCTGTTGATACAAGGTTGGAATTGCTTATTCAAAAAGCTATGAAAAAATTGATGGAAG
GAAGAACTAGTTTTGTCATTGCACACCGTCTATCAACGATTCAAGAGGCAGACAACATTTTAGTTCTAAAGGATGGTCAA
ATCATCGAACAAGGTAATCACCAGAAACTCCTAGCAGATAAAGGATTTTATTACGAATTATATAATAGCCAATTTTCAAA
TAGTAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(366-514)

ABC transporter transmembrane region (ABC_membrane)

(21-304)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

45.331

100

0.453