Detailed information NTG0735281

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: OEJ84_RS20710
• Genome accession: NZ_CP106791
• Coordinates: 3909781..3910926 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 23-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3904781..3915926

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OEJ84_RS20685 (OEJ84_20690)	albF	3904797..3906077 (+)	1281	WP_003242974.1	M16 family metallopeptidase	-
OEJ84_RS20690 (OEJ84_20695)	albG	3906074..3906775 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
OEJ84_RS20695 (OEJ84_20700)	ywhL	3906781..3908157 (-)	1377	WP_003244415.1	YncE family protein	-
OEJ84_RS20700 (OEJ84_20705)	ywhK	3908196..3909551 (-)	1356	WP_003227552.1	YncE family protein	-
OEJ84_RS20705	-	3909548..3909778 (-)	231	WP_009968328.1	hypothetical protein	-
OEJ84_RS20710 (OEJ84_20710)	rapF	3909781..3910926 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
OEJ84_RS20715 (OEJ84_20715)	phrF	3910910..3911029 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
OEJ84_RS20720 (OEJ84_20720)	ywhH	3911128..3911601 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
OEJ84_RS20725 (OEJ84_20725)	speB	3911633..3912505 (-)	873	WP_003227545.1	agmatinase	-
OEJ84_RS20730 (OEJ84_20730)	speE	3912566..3913396 (-)	831	WP_003227543.1	spermidine synthase	-
OEJ84_RS20735 (OEJ84_20735)	pbpG	3913598..3915673 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=735281 OEJ84_RS20710 WP_003227549.1 3909781..3910926(+) (rapF) [Bacillus subtilis strain 23-1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=735281 OEJ84_RS20710 WP_003227549.1 3909781..3910926(+) (rapF) [Bacillus subtilis strain 23-1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572