Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | N7980_RS08800 | Genome accession | NZ_CP106671 |
| Coordinates | 1685617..1686654 (+) | Length | 345 a.a. |
| NCBI ID | WP_041850016.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM116301 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1680617..1691654
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7980_RS08780 (N7980_08780) | rsbRD | 1680836..1681672 (+) | 837 | WP_041850019.1 | RsbT co-antagonist protein RsbRD | - |
| N7980_RS08785 (N7980_08785) | yqhB | 1681725..1683053 (-) | 1329 | WP_041850018.1 | hemolysin family protein | - |
| N7980_RS08790 (N7980_08790) | corA | 1683196..1684149 (+) | 954 | WP_029317911.1 | magnesium transporter CorA | - |
| N7980_RS08795 (N7980_08795) | comGA | 1684560..1685630 (+) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| N7980_RS08800 (N7980_08800) | comGB | 1685617..1686654 (+) | 1038 | WP_041850016.1 | comG operon protein ComGB | Machinery gene |
| N7980_RS08805 (N7980_08805) | comGC | 1686668..1686964 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| N7980_RS08810 (N7980_08810) | comGD | 1686954..1687385 (+) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| N7980_RS08815 (N7980_08815) | comGE | 1687369..1687716 (+) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| N7980_RS08820 (N7980_08820) | comGF | 1687742..1688125 (+) | 384 | WP_041850015.1 | ComG operon protein ComGF | Machinery gene |
| N7980_RS08825 (N7980_08825) | comGG | 1688126..1688500 (+) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| N7980_RS08830 (N7980_08830) | spoIITA | 1688571..1688750 (+) | 180 | WP_003230176.1 | YqzE family protein | - |
| N7980_RS08835 (N7980_08835) | yqzG | 1688792..1689118 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| N7980_RS08840 (N7980_08840) | tapA | 1689390..1690151 (+) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| N7980_RS08845 (N7980_08845) | sipW | 1690135..1690707 (+) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| N7980_RS08850 (N7980_08850) | tasA | 1690771..1691556 (+) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39728.18 Da Isoelectric Point: 9.6257
>NTDB_id=733879 N7980_RS08800 WP_041850016.1 1685617..1686654(+) (comGB) [Bacillus subtilis strain SRCM116301]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAALILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAALILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=733879 N7980_RS08800 WP_041850016.1 1685617..1686654(+) (comGB) [Bacillus subtilis strain SRCM116301]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGCTGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGCTGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |