Detailed information NTG0733727

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: N7921_RS13215
• Genome accession: NZ_CP106652
• Coordinates: 2527595..2529979 (-)
• Length: 794 a.a.
• NCBI ID: WP_144484760.1
• Uniprot ID: -
• Organism: Bacillus safensis strain 33.4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2522595..2534979

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7921_RS13180 (N7921_13180)	-	2523618..2524346 (+)	729	WP_048238982.1	amino acid ABC transporter ATP-binding protein	-
N7921_RS13185 (N7921_13185)	-	2524360..2525169 (+)	810	WP_144471222.1	transporter substrate-binding domain-containing protein	-
N7921_RS13190 (N7921_13190)	-	2525247..2525900 (+)	654	WP_144471224.1	amino acid ABC transporter permease	-
N7921_RS13195 (N7921_13195)	-	2525916..2526566 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
N7921_RS13200 (N7921_13200)	-	2526646..2526777 (-)	132	WP_003216198.1	YrzQ family protein	-
N7921_RS13205 (N7921_13205)	-	2526798..2526989 (-)	192	WP_003216308.1	hypothetical protein	-
N7921_RS13210 (N7921_13210)	-	2527003..2527521 (-)	519	WP_144484758.1	PRC-barrel domain-containing protein	-
N7921_RS13215 (N7921_13215)	recD2	2527595..2529979 (-)	2385	WP_144484760.1	ATP-dependent RecD-like DNA helicase	Machinery gene
N7921_RS13220 (N7921_13220)	-	2529999..2530652 (-)	654	WP_144484762.1	tetratricopeptide repeat protein	-
N7921_RS13225 (N7921_13225)	mnmA	2530713..2531831 (-)	1119	WP_144484764.1	tRNA 2-thiouridine(34) synthase MnmA	-
N7921_RS13230 (N7921_13230)	-	2531926..2533068 (-)	1143	WP_144484766.1	cysteine desulfurase family protein	-
N7921_RS13235 (N7921_13235)	cymR	2533087..2533506 (-)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89037.56 Da
• Isoelectric Point: 5.1565

>NTDB_id=733727 N7921_RS13215 WP_144484760.1 2527595..2529979(-) (recD2) [Bacillus safensis strain 33.4]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGSQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVNDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=733727 N7921_RS13215 WP_144484760.1 2527595..2529979(-) (recD2) [Bacillus safensis strain 33.4]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTCTATGGCAAAGTCACAAGCCACCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTGCCGACAACGAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGGAAAAAGACGGCTGAAGAAATCGTGGGGCAGCTTGGCAGTCAGACGCTCCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGATGTTCCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATTATGATCAGCCTGAATCAATATGGCTTTGGTCCACAGCTCAGTATGAAGATTTACCAAGTGTATGAAAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTCGTTAAGGATGTCGAGGGGATCGGATTTATTAAGGCGGACG
AGCTTGGCGCTAGAACAGGCATCTCAGGAAATGACCCAGAGAGGATTCGTGCCGCCTTGCTATATACAGTGGAGACAGCT
AGTCTTCAGGACGGTCATACGTACATACAAACAAAAGATTTGATCGTCGAAACCCGCAAACTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTCGCCAATCAGATTATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
AGCGCTGCTATCATCCATCTTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTTGGGGAGCTGGAGGAGCGGTTAGGCGTTCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGTGGGCCTGGAACAGGGAAGACAA
CAGTCATTAAAGGGATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCGTTCCCATTTGTACTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAACGGTTCGGAGGGCTTCTCGCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
GGCTGTTACCTTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAAGATATTACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGGTTTTCAGCAAAGGACATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGCGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCCGTGATCTCCTTTGATGGAAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACACGCTTATTGCTGCTCCATTCACAAATCACAAGGCAGTGAAT
TCCCAATTGTTGTGCTGCCAGTCGTGAGAAGCTATTACCGAATGCTCCGGCGAAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAACAAATCATGGATGCTGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTAAATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.523	100	0.797