Detailed information NTG0733281

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: P5657_RS10420
• Genome accession: NZ_CP120621
• Coordinates: 2025943..2027208 (-)
• Length: 421 a.a.
• NCBI ID: WP_134991389.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DSM 13019
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2020943..2032208

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5657_RS10395 (P5657_10395)	yrzK	2021186..2021356 (+)	171	WP_004399157.1	YrzK family protein	-
P5657_RS10400 (P5657_10400)	hisS	2021738..2023012 (+)	1275	WP_014480430.1	histidine--tRNA ligase	-
P5657_RS10405 (P5657_10405)	aspS	2023026..2024804 (+)	1779	WP_015714438.1	aspartate--tRNA ligase	-
P5657_RS10415 (P5657_10415)	tcdA	2025139..2025903 (+)	765	WP_046160684.1	tRNA threonylcarbamoyladenosine dehydratase	-
P5657_RS10420 (P5657_10420)	rarA	2025943..2027208 (-)	1266	WP_134991389.1	replication-associated recombination protein A	Machinery gene
P5657_RS10425 (P5657_10425)	cymR	2027411..2027827 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
P5657_RS10430 (P5657_10430)	iscSA	2027846..2028985 (+)	1140	WP_134991388.1	cysteine desulfurase family protein	-
P5657_RS10435 (P5657_10435)	mnmA	2029016..2030131 (+)	1116	WP_134991387.1	tRNA 2-thiouridine(34) synthase MnmA	-
P5657_RS10440 (P5657_10440)	yrrB	2030217..2030837 (+)	621	WP_205764506.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46484.40 Da
• Isoelectric Point: 7.3980

>NTDB_id=733281 P5657_RS10420 WP_134991389.1 2025943..2027208(-) (rarA) [Bacillus subtilis strain DSM 13019]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDVQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=733281 P5657_RS10420 WP_134991389.1 2025943..2027208(-) (rarA) [Bacillus subtilis strain DSM 13019]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATTATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATTTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGTTCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995