Detailed information NTG0733008

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: P5661_RS14685
• Genome accession: NZ_CP120600
• Coordinates: 2750437..2751702 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PRO112
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2745437..2756702

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5661_RS14665 (P5661_14665)	yrrB	2746808..2747428 (-)	621	WP_205764506.1	tetratricopeptide repeat protein	-
P5661_RS14670 (P5661_14670)	mnmA	2747514..2748629 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
P5661_RS14675 (P5661_14675)	iscSA	2748660..2749799 (-)	1140	WP_277708861.1	cysteine desulfurase family protein	-
P5661_RS14680 (P5661_14680)	cymR	2749818..2750234 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
P5661_RS14685 (P5661_14685)	rarA	2750437..2751702 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
P5661_RS14690 (P5661_14690)	tcdA	2751742..2752506 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
P5661_RS14700 (P5661_14700)	aspS	2752841..2754619 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
P5661_RS14705 (P5661_14705)	hisS	2754633..2755907 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
P5661_RS14710 (P5661_14710)	yrzK	2756289..2756459 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=733008 P5661_RS14685 WP_014480427.1 2750437..2751702(+) (rarA) [Bacillus subtilis strain PRO112]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=733008 P5661_RS14685 WP_014480427.1 2750437..2751702(+) (rarA) [Bacillus subtilis strain PRO112]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993