Detailed information NTG0732830

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: P5622_RS10715
• Genome accession: NZ_CP120598
• Coordinates: 2060583..2061848 (-)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain PRO115
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2055583..2066848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5622_RS10690 (P5622_10690)	yrzK	2055823..2055993 (+)	171	WP_004399157.1	YrzK family protein	-
P5622_RS10695 (P5622_10695)	hisS	2056375..2057649 (+)	1275	WP_003229755.1	histidine--tRNA ligase	-
P5622_RS10700 (P5622_10700)	aspS	2057663..2059441 (+)	1779	WP_003229758.1	aspartate--tRNA ligase	-
P5622_RS10710 (P5622_10710)	tcdA	2059777..2060541 (+)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
P5622_RS10715 (P5622_10715)	rarA	2060583..2061848 (-)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
P5622_RS10720 (P5622_10720)	cymR	2062051..2062467 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
P5622_RS10725 (P5622_10725)	iscSA	2062486..2063625 (+)	1140	WP_003246057.1	cysteine desulfurase family protein	-
P5622_RS10730 (P5622_10730)	mnmA	2063656..2064771 (+)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
P5622_RS10735 (P5622_10735)	yrrB	2064857..2065477 (+)	621	WP_010886584.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=732830 P5622_RS10715 WP_004398500.1 2060583..2061848(-) (rarA) [Bacillus subtilis strain PRO115]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=732830 P5622_RS10715 WP_004398500.1 2060583..2061848(-) (rarA) [Bacillus subtilis strain PRO115]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1