Detailed information NTG0730673

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: N5O82_RS21200
• Genome accession: NZ_CP104580
• Coordinates: 4496736..4498028 (-)
• Length: 430 a.a.
• NCBI ID: WP_279559173.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain GD04120
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4491736..4503028

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5O82_RS21185 (N5O82_21180)	rpoH	4494086..4494940 (-)	855	WP_003297176.1	RNA polymerase sigma factor RpoH	-
N5O82_RS21190 (N5O82_21185)	ftsX	4495052..4496071 (-)	1020	WP_102838920.1	permease-like cell division protein FtsX	-
N5O82_RS21195 (N5O82_21190)	ftsE	4496068..4496739 (-)	672	WP_045665759.1	cell division ATP-binding protein FtsE	-
N5O82_RS21200 (N5O82_21195)	pilA	4496736..4498028 (-)	1293	WP_279559173.1	signal recognition particle-docking protein FtsY	Machinery gene
N5O82_RS21205 (N5O82_21200)	-	4498257..4499612 (+)	1356	WP_125885942.1	pitrilysin family protein	-
N5O82_RS21210 (N5O82_21205)	-	4499605..4501146 (+)	1542	WP_106442492.1	pitrilysin family protein	-
N5O82_RS21215 (N5O82_21210)	rsmD	4501146..4501763 (+)	618	WP_017244112.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
N5O82_RS21220 (N5O82_21215)	-	4501757..4502161 (-)	405	WP_026006467.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 45893.21 Da
• Isoelectric Point: 4.5337

>NTDB_id=730673 N5O82_RS21200 WP_279559173.1 4496736..4498028(-) (pilA) [Stutzerimonas stutzeri strain GD04120]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPAPAEQPAAEQPDSESVEQTGAPVESPVATPQEEQPARVVEADMQPAEEIE
PVLLHPEPEPEPEPEPEPEPDPEPEPVPAPVVATAPEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDE
LETRLLTADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDAGKRPYVILVVGVNGVGKTTT
IGKLAKKLQLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVVAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHT
KDNLMEELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTKQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIR
YIGVGEGIDDLRTFEADAFVKALFSQREDA

Nucleotide

• Length: 1293 bp

>NTDB_id=730673 N5O82_RS21200 WP_279559173.1 4496736..4498028(-) (pilA) [Stutzerimonas stutzeri strain GD04120]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGTGAAAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCGCAGCCCGCGCCGGCAGAGCAGCCCGCCGCCGAACAGCCGGACAGCGAATCGGTCGAGCAGACCGGGGCGCCTGTCG
AATCGCCTGTCGCTACACCTCAGGAAGAGCAGCCGGCGCGCGTGGTCGAGGCCGATATGCAGCCGGCTGAGGAGATAGAG
CCGGTGCTGCTGCACCCTGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGATCCGGAGCCGGAGCCGGT
ACCTGCCCCGGTCGTAGCGACCGCGCCGGAGGCCCCAGCCAAGCTCGGCTTTTTCGCTCGCCTGCGCCAGGGACTGTCGA
AAACCAGCGCCAGCATTGGCGAAGGCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAG
CTGGAAACCCGCCTGCTGACCGCCGACGTCGGCGTCGAGGCGACCACCGCGATCATGCAGAATCTCACCCGGCGTGTCTC
GCGCAAGGAGCTGGCCGACAGCGGCGCGCTCTACACCGCGCTGCAGGAAGAACTCGTTGGCCTGCTCAAGCCGGTCGAGC
AGCCGCTGGCGATCGATGCTGGCAAGCGCCCGTATGTGATTCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACC
ATCGGCAAGCTGGCCAAGAAGCTGCAGCTCGACGGCAAGAAGGTCATGCTCGCCGCCGGCGACACATTCCGCGCCGCGGC
GGTGGAGCAGCTGCAGGTCTGGGGCGAGCGCAACGGCATTCCGGTGGTCGCCCAGCACACCGGTGCCGATTCCGCCTCGG
TGATCTTCGATGCGGTGCAGGCCGCCAAGGCGCGCGGCATCGACGTGCTGATCGCCGACACCGCGGGCCGTCTGCATACC
AAGGACAACCTGATGGAAGAGCTGAAGAAAGTCCGTCGGGTGATGGGCAAGCTCGACGAGTCGGCTCCCCACGAAGTCCT
GCTGGTACTCGACGCCGGCACTGGCCAGAACGCCATCAACCAGACCAAGCAGTTCAACCAGGCGGTCGAGCTGACCGGGC
TGGCACTGACCAAGCTCGACGGCACCGCCAAGGGCGGCGTGATCTTCGCGCTGGCCAAGCAGTTCGGCACGCCGATCCGC
TACATCGGCGTGGGTGAAGGCATCGACGATCTGCGCACCTTCGAGGCTGATGCCTTCGTCAAGGCGCTGTTCTCCCAGCG
GGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (225-424)

• SRP54-type protein, helical bundle domain (SRP54_N) (140-205)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.531	99.07	0.491