Detailed information NTG0729440

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: N4Q31_RS12445
• Genome accession: NZ_CP104391
• Coordinates: 2415147..2417531 (-)
• Length: 794 a.a.
• NCBI ID: WP_260774487.1
• Uniprot ID: -
• Organism: Bacillus safensis strain GX-H6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2410147..2422531

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4Q31_RS12410 (N4Q31_12410)	-	2410973..2411701 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
N4Q31_RS12415 (N4Q31_12415)	-	2411715..2412524 (+)	810	WP_313902600.1	transporter substrate-binding domain-containing protein	-
N4Q31_RS12420 (N4Q31_12420)	-	2412602..2413255 (+)	654	WP_039180271.1	amino acid ABC transporter permease	-
N4Q31_RS12425 (N4Q31_12425)	-	2413271..2413921 (+)	651	WP_260774477.1	amino acid ABC transporter permease	-
N4Q31_RS12430 (N4Q31_12430)	-	2414002..2414133 (-)	132	WP_003216198.1	YrzQ family protein	-
N4Q31_RS12435 (N4Q31_12435)	-	2414154..2414345 (-)	192	WP_211062958.1	hypothetical protein	-
N4Q31_RS12440 (N4Q31_12440)	-	2414359..2414877 (-)	519	WP_260774484.1	prc-barrel domain-containing protein	-
N4Q31_RS12445 (N4Q31_12445)	recD2	2415147..2417531 (-)	2385	WP_260774487.1	ATP-dependent RecD-like DNA helicase	Machinery gene
N4Q31_RS12450 (N4Q31_12450)	-	2417551..2418204 (-)	654	WP_260774489.1	lipopolysaccharide assembly protein LapB	-
N4Q31_RS12455 (N4Q31_12455)	mnmA	2418265..2419383 (-)	1119	WP_039180282.1	tRNA 2-thiouridine(34) synthase MnmA	-
N4Q31_RS12460 (N4Q31_12460)	-	2419478..2420620 (-)	1143	WP_260774490.1	cysteine desulfurase family protein	-
N4Q31_RS12465 (N4Q31_12465)	cymR	2420639..2421058 (-)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89092.61 Da
• Isoelectric Point: 5.1047

>NTDB_id=729440 N4Q31_RS12445 WP_260774487.1 2415147..2417531(-) (recD2) [Bacillus safensis strain GX-H6]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKMKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFSIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVYDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=729440 N4Q31_RS12445 WP_260774487.1 2415147..2417531(-) (recD2) [Bacillus safensis strain GX-H6]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCCGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTCACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACGAAGCAAGGCATTATACATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGAAAAAAGACGGCGGAAGAAATTGTGGGACAGCTTGGCAATCAGACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTACGATGTACCGCGCTTATCCAAAATGAAGGCGGATAAGCTAGCCGCAGCGCTTCAGGAACATCAAGGA
CTGGAACAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTGTACGAGAG
TGAAACGCTGCAAAAGATCGAGGAAAATCCGTATCAGCTTGTTAAGGATGTTGAGGGGATCGGATTTATTAAGGCGGATG
AGCTCGGCGCTAGAACAGGCATCTCAGGTAATGATCCAGAGCGGATTCGCGCAGCCTTGCTATATACAGTGGAGACAGCT
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAATCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
ACCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTTGCCAAACGCATTCAAAAAATCGTCTCACAAACAGAA
TACGCGGATCAATTTCCTGAATCAGAATTCCTGCTTGCACTTGGTGAGCTGGAGGAGCGATTAGGCGTCCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGTGGACCTGGTACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCTCTTGATCCGAGTGATTATAAAAAGGATGAA
TCCTTCCCATTTGTACTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAACGGATCGGAGGGCTTCTCGCATGATGAAGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTTGATATTTGGCTGGCGAATCATTTGTTTAAAGCCATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCTGTGCC
GGCTGTTACTCTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCCCATGATATGAAAAATGGTG
TGCTGCCAAAGGATATTACTGCACGCTCAAAGGATCGGTCCTTCATTCAATGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGACATTCAAGTACTCGCACCAATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGAACAGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCAGAGAACAATATCTTTAACGGCGATATC
GGCGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCCGTGATATCTTTTGATGGAAATGA
AATCACCTTTACGAAAAAGGATTTTCATCAATTTACTCATGCTTATTGCTGCTCCATCCACAAATCACAAGGCAGTGAAT
TTTCGATTGTTGTGCTGCCAGTTGTGAGGAGCTATTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCGATTACACGA
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTTGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTATATGACGCAAATATTGGAATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.271	100	0.795