Detailed information NTG0728751

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: N4T40_RS17455
• Genome accession: NZ_CP104335
• Coordinates: 3529701..3530402 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594590.1
• Uniprot ID: A0A427R546
• Organism: Acinetobacter baumannii strain 2021CK-01408
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3524701..3535402

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4T40_RS17425 (N4T40_17425)	-	3525007..3525450 (-)	444	WP_001246674.1	SRPBCC family protein	-
N4T40_RS17430 (N4T40_17430)	tadA	3525520..3526023 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
N4T40_RS17435 (N4T40_17435)	-	3526030..3527154 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
N4T40_RS17440 (N4T40_17440)	ung	3527151..3527864 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
N4T40_RS17445 (N4T40_17445)	-	3527915..3528511 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
N4T40_RS17450 (N4T40_17450)	gspK	3528742..3529701 (-)	960	WP_000301471.1	type II secretion system minor pseudopilin GspK	-
N4T40_RS17455 (N4T40_17455)	xcpW	3529701..3530402 (-)	702	WP_000594590.1	type II secretion system minor pseudopilin GspJ	Machinery gene
N4T40_RS17460 (N4T40_17460)	xcpV	3530402..3530782 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
N4T40_RS17465 (N4T40_17465)	-	3530772..3531326 (-)	555	WP_000841373.1	type II secretion system protein	-
N4T40_RS17470 (N4T40_17470)	-	3531336..3531944 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
N4T40_RS17475 (N4T40_17475)	-	3531982..3532755 (-)	774	WP_000497301.1	TatD family hydrolase	-
N4T40_RS17480 (N4T40_17480)	-	3532773..3533114 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
N4T40_RS17485 (N4T40_17485)	-	3533126..3534106 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
N4T40_RS17490 (N4T40_17490)	kdsB	3534118..3534879 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26627.52 Da
• Isoelectric Point: 9.3468

>NTDB_id=728751 N4T40_RS17455 WP_000594590.1 3529701..3530402(-) (xcpW) [Acinetobacter baumannii strain 2021CK-01408]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWTYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=728751 N4T40_RS17455 WP_000594590.1 3529701..3530402(-) (xcpW) [Acinetobacter baumannii strain 2021CK-01408]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGACTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A427R546

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991