Detailed information NTG0726620

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: P1I87_RS01400
• Genome accession: NZ_CP119576
• Coordinates: 237719..240139 (-)
• Length: 806 a.a.
• NCBI ID: WP_000451609.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain Guangzhou-SAG092
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 232719..245139

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P1I87_RS01365 (P1I87_01365)	-	233270..233560 (+)	291	WP_153204977.1	DUF5962 family protein	-
P1I87_RS01370 (P1I87_01370)	-	233553..233915 (+)	363	WP_153204973.1	transposase	-
P1I87_RS01375 (P1I87_01375)	-	233915..234271 (+)	357	WP_153204971.1	transposase	-
P1I87_RS01380 (P1I87_01380)	-	234837..235130 (+)	294	Protein_216	methylase	-
P1I87_RS01385 (P1I87_01385)	-	235186..235866 (-)	681	WP_001015311.1	IS6-like element IS1216 family transposase	-
P1I87_RS01390 (P1I87_01390)	dinB	235958..237052 (+)	1095	WP_000904560.1	DNA polymerase IV	-
P1I87_RS01395 (P1I87_01395)	-	237123..237605 (-)	483	WP_000255475.1	hypothetical protein	-
P1I87_RS01400 (P1I87_01400)	recD/recD2/recDB	237719..240139 (-)	2421	WP_000451609.1	ATP-dependent RecD-like DNA helicase	Machinery gene
P1I87_RS01405 (P1I87_01405)	lepB	240268..240861 (-)	594	WP_000657514.1	signal peptidase I	-
P1I87_RS01410 (P1I87_01410)	rnhC	240877..241770 (-)	894	WP_001092527.1	ribonuclease HIII	-
P1I87_RS01415 (P1I87_01415)	zapA	241881..242192 (+)	312	WP_000448289.1	cell division protein ZapA	-
P1I87_RS01420 (P1I87_01420)	-	242195..242737 (+)	543	WP_000949954.1	CvpA family protein	-

Sequence

Protein

• Length: 806 a.a.
• Molecular weight: 91004.40 Da
• Isoelectric Point: 4.7227

>NTDB_id=726620 P1I87_RS01400 WP_000451609.1 237719..240139(-) (recD/recD2/recDB) [Streptococcus agalactiae strain Guangzhou-SAG092]
MEVFFTGTIERIIFENASNFFKILLLEIEDTDSDFDDVEVIITGTMADVIEGEEYTFWGTLTQHPKYGEQLQSVRYERAK
PTSGGLVKYFSSEQFKGIGKKTAQRIVELYGDNTIDKILESPEQLSTISGLSKINREAFIAKLKLNYGTEQVLAKLAEYG
LSNRAAIQIFDHYKEESLEVINENPYQLVEDIQGIGFKIADQLAEQVGIESDSPKRFRAAIIHTLVESSMEQGDTYIEAR
TLLEKTITLLEEARQIELDPSIVAKELTNLIAEDKVQHIGTKIFSNTLFFAEEGIKKNLQRILNQPLDKQLNHKDIDREI
RDIQKSLNIHYDNIQEKAIREALLSKVFILTGGPGTGKTTVINGIIEAYSELHHIDLNKNDIPIVLAAPTGRAARRMNEL
TGLPSATIHRHLGLNGDSDYQSLDDYLDCSLIIIDEFSMVDTWLANQLFDALDSHTQVIIVGDSDQLPSVGPGQVLADLL
NINALPHVKLEKIFRQSEESTIVTLANQMRQGFLPEDFTAKKADRSYFEASANIIPNMISKIVQSALKSGIEAHEIQILA
PMYRGQAGINNLNLIMQNLLNPLKDNNQFTFNDINFRIGDKVLHLVNDTELNVFNGDIGYITDLIPAKYTESKQDEIYMT
FDGQEVIYQRKEWLKITLAYAMSIHKSQGSEFQVVILPITRQSGRMLQRNLIYTAITRSKSKLILLGEIGAFDFAVKNEG
AKRNTYLIERFENKQEIANSQKIEDSSIDQKIDNTIINTSIPKTATPIEQTNLSKITYRLTEENYLTIDPMIGINQQDIS
AIFDSK

Nucleotide

• Length: 2421 bp

>NTDB_id=726620 P1I87_RS01400 WP_000451609.1 237719..240139(-) (recD/recD2/recDB) [Streptococcus agalactiae strain Guangzhou-SAG092]
ATGGAAGTATTTTTTACAGGAACCATTGAACGCATTATATTTGAAAATGCCAGCAATTTTTTTAAAATATTACTTCTGGA
AATCGAAGATACGGATAGCGATTTTGATGATGTAGAAGTAATTATTACTGGTACTATGGCCGACGTTATAGAGGGAGAAG
AATATACTTTTTGGGGAACACTAACCCAACATCCAAAATACGGCGAGCAACTACAAAGTGTACGCTATGAAAGAGCCAAG
CCTACTTCAGGTGGCCTTGTGAAATACTTTTCTAGCGAACAATTTAAAGGAATTGGTAAAAAGACTGCCCAACGCATCGT
AGAACTCTATGGAGATAATACCATTGATAAAATCCTTGAATCCCCTGAACAGTTAAGTACAATCTCAGGACTATCAAAAA
TTAATAGAGAAGCATTCATCGCTAAACTGAAACTCAATTATGGAACAGAGCAAGTTTTAGCTAAACTCGCTGAATATGGG
TTAAGCAATCGTGCTGCTATTCAAATATTTGATCACTATAAAGAAGAATCACTTGAAGTGATAAACGAAAATCCTTATCA
ACTTGTTGAGGATATCCAAGGTATCGGTTTTAAAATAGCTGACCAACTTGCTGAACAAGTCGGTATTGAAAGTGATTCTC
CTAAACGCTTTCGTGCTGCTATTATTCATACTTTAGTTGAGTCTTCTATGGAGCAAGGAGATACCTATATTGAGGCTCGT
ACTCTCTTGGAAAAAACCATTACTCTCCTTGAAGAAGCTCGTCAAATCGAACTAGATCCTTCAATTGTTGCTAAGGAATT
GACAAATTTAATTGCAGAAGATAAAGTGCAACATATTGGAACTAAAATTTTTAGTAATACTCTATTTTTTGCCGAAGAAG
GCATCAAAAAAAACTTACAACGAATACTAAATCAGCCTCTTGATAAACAACTAAATCACAAAGATATTGACCGTGAAATC
AGAGATATTCAAAAATCTTTAAATATCCACTACGATAATATCCAAGAAAAAGCTATTAGAGAAGCTTTACTAAGTAAGGT
ATTTATCTTGACTGGTGGCCCAGGAACAGGTAAAACAACAGTTATAAATGGTATTATTGAAGCCTATTCCGAGTTACATC
ATATTGATTTAAACAAAAATGATATTCCTATTGTACTTGCTGCTCCTACAGGTCGTGCTGCTAGACGCATGAATGAACTT
ACCGGTTTACCGAGTGCTACTATTCATAGGCATTTGGGATTAAACGGAGATAGTGACTATCAAAGTCTAGATGACTATCT
AGATTGTTCCTTAATTATCATTGATGAATTTTCAATGGTTGACACTTGGCTTGCTAATCAATTATTTGACGCTTTGGACT
CGCACACACAAGTTATTATTGTCGGAGATAGTGATCAATTACCGTCTGTAGGTCCAGGACAAGTTCTAGCAGATCTTTTA
AATATAAATGCACTTCCACACGTTAAACTTGAAAAGATTTTTAGACAATCAGAAGAATCAACTATTGTGACTTTAGCTAA
TCAAATGAGACAGGGCTTTTTGCCAGAGGACTTTACAGCTAAAAAAGCCGATCGCTCATACTTTGAAGCATCTGCTAATA
TCATCCCAAATATGATTTCTAAAATTGTTCAATCTGCACTTAAGAGCGGTATTGAAGCTCATGAAATTCAAATTTTAGCT
CCTATGTATCGCGGCCAAGCAGGTATTAATAATCTTAACCTTATCATGCAAAATCTCCTCAATCCATTAAAAGATAATAA
CCAATTTACTTTTAATGATATAAATTTCCGAATAGGAGATAAAGTGTTACATTTAGTCAACGATACAGAGCTTAATGTTT
TTAATGGGGATATTGGTTACATAACGGACCTTATACCAGCCAAATATACTGAGAGCAAGCAAGATGAGATTTATATGACT
TTTGACGGTCAAGAAGTTATCTATCAACGCAAAGAATGGCTTAAAATAACACTAGCCTATGCTATGAGTATTCATAAATC
ACAGGGTTCTGAATTTCAAGTTGTTATTCTGCCAATAACGAGACAGAGTGGTCGAATGTTACAGCGAAACCTTATTTATA
CAGCTATTACGAGATCTAAAAGTAAACTAATACTTTTAGGAGAAATTGGTGCATTTGATTTCGCTGTTAAAAACGAGGGG
GCAAAGCGCAATACTTATCTGATAGAAAGATTTGAAAACAAGCAAGAAATAGCTAATTCTCAAAAAATTGAAGATAGCTC
AATAGATCAAAAGATTGACAACACAATAATTAATACGTCCATTCCAAAAACAGCAACACCAATTGAGCAGACTAATCTTT
CAAAAATAACTTATCGCCTAACTGAAGAAAATTATTTAACAATCGATCCAATGATTGGTATTAATCAACAAGATATAAGT
GCAATTTTTGATAGTAAATAA

Domains

Predicted by InterProScan.

• AAA domain (AAA_30) (332-520)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-706)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-638)

• Helix-hairpin-helix containing domain (HHH_RecD2) (147-236)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	43.658	92.928	0.406