Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   PY824_RS09900 Genome accession   NZ_CP119172
Coordinates   1886617..1888953 (-) Length   778 a.a.
NCBI ID   WP_115265920.1    Uniprot ID   -
Organism   Streptococcus macedonicus strain SGM CIP105683     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1881617..1893953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PY824_RS09870 (PY824_09870) trxA 1882050..1882364 (-) 315 WP_014295243.1 thioredoxin -
  PY824_RS09875 (PY824_09875) - 1882626..1883123 (+) 498 WP_014295244.1 phosphatase PAP2 family protein -
  PY824_RS09880 (PY824_09880) nadC 1883203..1884063 (-) 861 WP_039671206.1 carboxylating nicotinate-nucleotide diphosphorylase -
  PY824_RS09885 (PY824_09885) - 1884091..1884999 (-) 909 Protein_1889 FAD-binding protein -
  PY824_RS11675 - 1884960..1885334 (-) 375 WP_014295248.1 FAD-binding protein -
  PY824_RS09890 (PY824_09890) nadA 1885632..1885910 (+) 279 WP_252989168.1 quinolinate synthase NadA -
  PY824_RS09895 (PY824_09895) - 1885894..1886553 (+) 660 WP_257235749.1 quinolinate synthase NadA -
  PY824_RS09900 (PY824_09900) mutS/mutS2 1886617..1888953 (-) 2337 WP_115265920.1 endonuclease MutS2 Machinery gene
  PY824_RS09905 (PY824_09905) - 1889059..1889607 (-) 549 WP_014295250.1 CvpA family protein -
  PY824_RS09910 (PY824_09910) zapA 1889610..1889918 (-) 309 WP_039671208.1 cell division protein ZapA -
  PY824_RS09915 (PY824_09915) rnhC 1890040..1890942 (+) 903 WP_039671209.1 ribonuclease HIII -
  PY824_RS09920 (PY824_09920) lepB 1890959..1891552 (+) 594 WP_014295253.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87716.07 Da        Isoelectric Point: 6.1316

>NTDB_id=725459 PY824_RS09900 WP_115265920.1 1886617..1888953(-) (mutS/mutS2) [Streptococcus macedonicus strain SGM CIP105683]
MNNRILEQLEFDKVKQLFAGYLQTEQGQDELRKLEPMTDPDRISRSFDEISDMEQIFIEHHSFGMGSLRDISESMRRLEL
DADVNISEIIDIKKVLQLSAEIKHFYNDLENVELSALNTLFEKIELLPSLQGSLQAINDGGFIENFASSELDRIRRQINH
DEGRVRQILQDILKKQADHLTETLIASRNGRAVLPVKNSYRNRISGVVHDISASGSTVYIEPRAVVQLNEEITQLRADER
HEMARILRELSNMLRPHTNIIRNNAWVLGHLDFVRAKFLFMQENNAIVPQLSADKTVQLLQTRHPLLIDPVANDLHFLNE
LTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD
KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPG
RSNAFEIARRLGLAEIIVNEAERLTDSDTDVNRIIEHLEEQTHESRKRLDHIKEVEQDNLKFNRAVKKLYNEFSHAKDKE
LEKASAKAQEIVDKAIAESEEILKNLHDRASLKPHEVIEAKSQLKKLVPEVDLSKNKVLKKAKKLRAPRVGDDIVVTAYG
QRGTLVNQGKNGKWEVQVGLIKMTLKEDEFTLVKVQEEAQKPKKKQVNVVKKSKKSAGPRARLDLRGKRYEEAMQELDEF
IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLE

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=725459 PY824_RS09900 WP_115265920.1 1886617..1888953(-) (mutS/mutS2) [Streptococcus macedonicus strain SGM CIP105683]
ATGAACAACAGAATTTTAGAACAGTTAGAATTTGATAAAGTCAAGCAACTTTTTGCTGGCTATTTACAGACTGAGCAAGG
CCAAGACGAGTTACGTAAACTTGAGCCAATGACTGATCCTGACCGCATTTCACGTTCTTTTGATGAAATATCGGACATGG
AACAGATTTTCATTGAACACCATTCTTTTGGAATGGGCAGTTTGCGTGACATTTCTGAAAGTATGCGTCGCTTGGAATTG
GATGCTGACGTTAATATCTCAGAAATTATCGACATCAAGAAAGTCTTGCAATTATCAGCTGAAATCAAGCATTTTTATAA
TGATTTGGAAAATGTAGAGTTGTCTGCATTAAATACTCTTTTTGAGAAGATTGAATTGTTGCCAAGTCTGCAAGGTAGCT
TACAAGCGATTAATGACGGCGGTTTCATTGAAAATTTTGCAAGTTCAGAATTGGACCGTATTCGTCGCCAAATCAATCAT
GACGAAGGTAGAGTTCGTCAAATTTTGCAGGATATTTTGAAAAAACAAGCTGATCATTTGACAGAGACTCTGATTGCTAG
TCGTAATGGTCGTGCGGTTTTACCTGTGAAAAATAGCTACCGCAACCGTATTTCAGGGGTTGTGCATGATATTTCGGCAT
CAGGAAGTACGGTTTATATTGAACCGCGCGCAGTAGTGCAACTTAATGAAGAAATCACGCAATTGCGAGCAGATGAACGT
CACGAAATGGCACGTATTTTACGTGAATTGTCAAATATGCTTCGCCCACATACTAATATTATTCGTAACAATGCGTGGGT
TTTAGGGCATTTGGATTTTGTTCGTGCTAAGTTCCTCTTCATGCAGGAAAACAACGCAATCGTGCCACAATTATCAGCAG
ATAAAACCGTGCAACTATTACAAACTCGCCACCCGCTTTTGATCGATCCAGTCGCCAATGACCTTCATTTTCTTAACGAA
TTGACCGTTATTGTCATTACAGGACCAAATACTGGTGGTAAGACAGTCATGTTGAAAACATTGGGCTTAGCGCAGCTTAT
GGCACAATCAGGTTTGCCAATCTTGGCTGACAAAGGTAGTAAAGTCGCCGTATTTAATGAAATTTTTGCAGATATTGGCG
ATGAGCAATCTATCGAACAAAGTTTGTCAACATTTTCAAGTCATATGACAAATATTGTTGAGATTTTGGCAGCGGCGGAT
AAAGATAGTCTTGTCTTGGTCGATGAATTGGGAGCAGGAACTGACCCACAAGAAGGTGCCAGTCTTGCGATTGCCATTCT
TGAACACCTTCGCCTCATGGAAATTAAAACCATGGCAACGACACATTATCCAGAATTGAAAGCTTACGGTATTGAGACAG
AATTTGTGGAAAATGCCAGCATGGAATTTGATACAGAGACGTTAAGTCCAACTTATCATTTTATGCAAGGTGTACCAGGG
CGCTCCAATGCCTTTGAAATTGCTCGTCGTCTTGGTTTAGCAGAGATTATTGTCAATGAAGCAGAGCGTTTGACGGACTC
TGATACGGATGTTAACCGCATCATCGAGCATTTGGAAGAACAAACCCATGAAAGTCGTAAACGACTTGACCATATCAAAG
AAGTGGAACAAGATAACCTCAAATTCAATCGTGCGGTCAAGAAACTTTACAACGAATTTTCACATGCCAAGGACAAAGAA
CTTGAAAAAGCTAGCGCCAAAGCGCAAGAAATTGTAGATAAAGCCATAGCAGAGAGTGAAGAAATTCTCAAAAATCTTCA
TGATAGAGCAAGCCTTAAACCGCATGAAGTTATTGAAGCCAAAAGTCAGCTGAAAAAATTGGTGCCTGAAGTTGATTTGT
CGAAAAATAAAGTCCTCAAGAAAGCTAAAAAATTGCGCGCACCGCGAGTGGGTGATGACATTGTCGTCACAGCTTACGGA
CAACGCGGAACATTGGTTAACCAAGGGAAAAACGGAAAATGGGAAGTACAAGTTGGTCTTATTAAAATGACACTTAAAGA
GGACGAATTTACCCTTGTTAAAGTTCAAGAGGAAGCCCAAAAGCCGAAGAAAAAACAAGTCAATGTGGTCAAGAAAAGCA
AAAAATCAGCTGGTCCACGTGCCCGTCTTGATCTTCGTGGTAAACGCTATGAAGAAGCCATGCAAGAATTGGATGAATTT
ATCGACCAAGCCTTGCTAAATAACATGGCACAAGTCGATATTATTCACGGTATCGGAACAGGTGTTATCCGTGAAGGTGT
CACAAAATACCTTCGTCGCAACAAACACGTCAAATCATTTGGCTACGCCCCACAAAACGCAGGTGGCAGCGGCTGCACTA
TTGCAAATTTAGAGTGA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-777)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.909

100

0.416