Detailed information NTG0724809

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: NYR47_RS26215
• Genome accession: NZ_CP103777
• Coordinates: 5049389..5050738 (-)
• Length: 449 a.a.
• NCBI ID: WP_259416500.1
• Uniprot ID: -
• Organism: Bacillus toyonensis strain DC11
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5044389..5055738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR47_RS26195	secA	5044718..5047225 (-)	2508	WP_000579396.1	preprotein translocase subunit SecA	-
NYR47_RS26200	hpf	5047500..5048042 (-)	543	WP_000671188.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
NYR47_RS26205	cspC	5048361..5048558 (-)	198	WP_002045823.1	cold shock protein CspC	-
NYR47_RS26210	-	5048685..5049389 (-)	705	WP_259416499.1	ComF family protein	-
NYR47_RS26215	comFA	5049389..5050738 (-)	1350	WP_259416500.1	ATP-dependent helicase ComFA	Machinery gene
NYR47_RS26220	-	5050866..5052263 (-)	1398	WP_259416501.1	NlpC/P60 family protein	-
NYR47_RS26225	-	5052424..5052738 (-)	315	WP_097927503.1	helix-turn-helix domain-containing protein	-
NYR47_RS26230	-	5052910..5053752 (-)	843	WP_000844773.1	DegV family protein	-
NYR47_RS26235	-	5053991..5054626 (+)	636	WP_000926675.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51063.08 Da
• Isoelectric Point: 9.9790

>NTDB_id=724809 NYR47_RS26215 WP_259416500.1 5049389..5050738(-) (comFA) [Bacillus toyonensis strain DC11]
MLAGKQLLLEELSSDLRDTLQDLKKKRKVVCVQGVIKKASKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAEKEGEMDVNPLQWKGNLSTGQKLAAQGVMEAVKQKESFFIWAVCGAGKTEMLFYGIAEALQKGERVCIAT
PRTDVVLELAPRLKEVFPNINVAALYGGSLDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVKQAI
KEKAACIYLTATPDEEWKRNLRKGKQKGIVVSGRYHRHPLPVPKFCWCGNWKKSLINKRIPRVLLQWLKVYLNKKHPIFL
FVPHVRYIEKMSRLLKLLDDRVAGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGTEEEIFSESALV
QTAGRVGRSFEEPYGEVIYFHYGKTEAMVRAKKHIRSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=724809 NYR47_RS26215 WP_259416500.1 5049389..5050738(-) (comFA) [Bacillus toyonensis strain DC11]
ATGTTAGCAGGGAAACAGTTACTATTAGAGGAACTCTCTTCAGACTTACGGGATACATTACAAGATTTGAAAAAGAAGAG
GAAGGTCGTATGTGTACAAGGTGTAATAAAGAAGGCTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGTAGTAAAGTCTGCACATATTGCCGGAAGTGCATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTGCCGAAAAAGAGGGAGAAATGGATGTAAATCCGTTACAGTGGAAAGGGAATTT
ATCTACTGGCCAGAAGTTGGCTGCGCAAGGTGTTATGGAGGCTGTTAAACAGAAAGAATCGTTTTTTATTTGGGCTGTGT
GCGGCGCTGGAAAAACAGAAATGTTGTTTTATGGTATTGCAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTACTTGAATTAGCACCGAGATTGAAAGAAGTATTTCCGAATATAAATGTAGCTGCTTTATACGG
TGGGAGTTTAGATCGGGAAAAAGATGCAGCTTTAGTCGTTGCGACCACCCATCAGCTATTGCGTTATTATAGAGCGTTTC
ATGTCATGATTGTAGATGAAATAGATGCCTTTCCATACCATGCAGATCAAATGTTGCAGTATGCGGTAAAACAAGCGATA
AAAGAGAAGGCGGCATGTATTTATTTAACTGCAACTCCAGATGAAGAGTGGAAGCGTAACCTTAGAAAGGGGAAACAAAA
AGGTATCGTTGTTTCTGGACGGTATCACCGTCATCCGTTGCCAGTCCCAAAATTTTGCTGGTGCGGAAACTGGAAAAAAA
GCCTCATCAATAAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAAGTATACTTAAATAAAAAGCACCCCATTTTTTTA
TTTGTTCCCCATGTGCGATATATAGAAAAAATGAGTCGGTTATTGAAGCTGTTAGACGATAGAGTTGCCGGTGTGCATGC
AGAAGATCCAATGAGAAAAGAAAAAGTTGCAGCTTTCAGAAAGGGAGAAATTCCTTTATTAGTTACAACGACGATTTTGG
AGAGAGGAGTAACGGTGAAAAATTTGCAAGTTGCGGTTTTAGGGACGGAAGAAGAAATATTTTCAGAAAGTGCACTCGTA
CAAACTGCAGGCCGGGTAGGTCGTAGTTTTGAAGAGCCGTATGGAGAGGTCATTTATTTTCATTATGGTAAGACAGAGGC
GATGGTGCGCGCGAAAAAACACATTCGAAGTATGAACAAAAATGCGAAAGAACAAGGGTTGATCGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (106-254)

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.226	98.441	0.494