Detailed information NTG0072411

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: myaer102_RS24095
• Genome accession: NZ_AP019314
• Coordinates: 4651145..4652260 (+)
• Length: 371 a.a.
• NCBI ID: WP_012264475.1
• Uniprot ID: A0A3G9JU67
• Organism: Microcystis viridis NIES-102
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4646145..4657260

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
myaer102_RS24065 (myaer102_43980)	-	4646384..4647007 (+)	624	WP_041803792.1	class I SAM-dependent methyltransferase	-
myaer102_RS24070 (myaer102_43990)	-	4647107..4647661 (+)	555	WP_004163483.1	YqeG family HAD IIIA-type phosphatase	-
myaer102_RS24075 (myaer102_44000)	-	4647914..4648669 (+)	756	WP_012264474.1	class I SAM-dependent methyltransferase	-
myaer102_RS24080 (myaer102_44010)	-	4648728..4649516 (+)	789	WP_125731853.1	ECF transporter S component	-
myaer102_RS24085 (myaer102_44020)	ilvC	4649641..4650633 (-)	993	WP_004163480.1	ketol-acid reductoisomerase	-
myaer102_RS24095 (myaer102_44030)	pilM	4651145..4652260 (+)	1116	WP_012264475.1	type IV pilus assembly protein PilM	Machinery gene
myaer102_RS24100 (myaer102_44040)	-	4652270..4653040 (+)	771	WP_004163474.1	PilN domain-containing protein	-
myaer102_RS24105 (myaer102_44050)	-	4653037..4653828 (+)	792	WP_004163472.1	hypothetical protein	-
myaer102_RS24110 (myaer102_44060)	-	4653900..4655996 (+)	2097	WP_041803796.1	secretin N-terminal domain-containing protein	-
myaer102_RS24120 (myaer102_44070)	-	4656461..4656658 (+)	198	WP_002737592.1	DUF751 family protein	-
myaer102_RS24125 (myaer102_44080)	rbfA	4656700..4657086 (+)	387	WP_012264477.1	30S ribosome-binding factor RbfA	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 41117.08 Da
• Isoelectric Point: 4.3747

>NTDB_id=72411 myaer102_RS24095 WP_012264475.1 4651145..4652260(+) (pilM) [Microcystis viridis NIES-102]
MVSFFKKLLTKKPQGVGLEITPERINIAQIAKQGQNYKLVKCCSSDIPEGIFEEGKIVDSPALAELIQEVLKENKINSKR
VATAVPMRESIIRIIPIPSELDDQELRNLVLNHEASLYLPYPREEVDLDYQKLGYFQDEDGIEKVQVLLVATRREITDAY
METFQQAGLQVDVLEINSFALIRTIREHLRQFSSNEAAVIVDIEFDNTEIAIVVDGVPQFSRTVPIGTFQLQNALSRAMN
LPTSRSPEILLGMTIPITAFDSLSSNTGTSGAPTNAGMTALMRVLGELTDELRRSINFYLNQSDELEIVQLLLAGPGGGL
AQLDEYFTQRLSVPTMAIDPITSLNLDTTQEIPNTERPGLGTVLGLGLREV

Nucleotide

• Length: 1116 bp

>NTDB_id=72411 myaer102_RS24095 WP_012264475.1 4651145..4652260(+) (pilM) [Microcystis viridis NIES-102]
ATGGTAAGTTTTTTTAAAAAGCTATTGACAAAAAAACCTCAAGGTGTTGGGTTAGAGATCACCCCAGAGCGTATTAACAT
AGCTCAGATCGCCAAACAGGGACAAAATTATAAATTAGTTAAATGTTGTTCGTCGGATATCCCGGAAGGCATCTTTGAGG
AGGGAAAAATCGTCGATTCCCCCGCTTTAGCGGAATTAATCCAAGAAGTCCTCAAGGAAAATAAAATTAACAGCAAACGA
GTCGCTACTGCTGTGCCGATGCGCGAGTCAATTATCCGGATTATCCCCATTCCCTCGGAATTGGACGATCAGGAATTGCG
AAATCTGGTCTTAAATCATGAGGCTAGTTTATACCTTCCCTATCCTCGCGAGGAAGTGGATCTCGACTACCAGAAACTAG
GCTACTTTCAGGATGAAGACGGGATCGAAAAAGTACAAGTATTATTAGTTGCGACTCGTCGGGAGATTACCGATGCCTAT
ATGGAAACCTTCCAACAGGCAGGATTACAGGTAGATGTGCTAGAAATTAATAGTTTTGCCCTAATTCGGACGATTCGCGA
GCATTTGCGACAGTTTAGTTCCAATGAAGCCGCCGTTATTGTTGATATAGAATTTGATAACACGGAAATTGCCATCGTGG
TTGACGGCGTTCCCCAATTTTCCCGCACTGTCCCCATCGGCACTTTCCAGCTACAAAATGCCCTCTCCAGGGCGATGAAT
TTGCCCACCTCCCGCAGTCCTGAGATTCTTTTGGGGATGACAATTCCGATTACTGCCTTTGATAGTCTTAGCAGCAATAC
CGGCACTTCCGGGGCCCCTACTAACGCCGGGATGACGGCACTGATGCGCGTTTTAGGGGAATTAACCGATGAGTTACGGC
GATCGATTAATTTCTATCTTAACCAAAGTGATGAACTGGAAATCGTCCAGTTACTTTTAGCCGGTCCCGGGGGCGGTTTA
GCGCAACTAGACGAATACTTTACTCAACGTCTCAGCGTCCCCACCATGGCAATCGATCCGATCACATCACTGAACTTGGA
TACAACTCAAGAGATTCCTAATACCGAAAGACCCGGATTAGGAACAGTTCTCGGTTTAGGATTACGGGAGGTATAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (285-369)

• Type IV pilus assembly protein PilM; (PilM_2) (17-241)

3D structure

• AlphaFold DB: A0A3G9JU67

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	75.946	99.73	0.757