Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | PVK53_RS00680 | Genome accession | NZ_CP118308 |
| Coordinates | 104346..104630 (+) | Length | 94 a.a. |
| NCBI ID | WP_002987779.1 | Uniprot ID | A0A0H2USY2 |
| Organism | Streptococcus pyogenes strain 20203206 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 99346..109630
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVK53_RS00655 (PVK53_00650) | - | 101292..101657 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| PVK53_RS00660 (PVK53_00655) | comGA | 101750..102688 (+) | 939 | WP_002987773.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| PVK53_RS00665 (PVK53_00660) | comGB | 102624..103658 (+) | 1035 | WP_223845212.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| PVK53_RS00670 (PVK53_00665) | comGC | 103660..103986 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| PVK53_RS00675 (PVK53_00670) | comGD | 103961..104389 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| PVK53_RS00680 (PVK53_00675) | comGE | 104346..104630 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| PVK53_RS00685 (PVK53_00680) | comGF | 104623..105057 (+) | 435 | WP_002987783.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| PVK53_RS00690 (PVK53_00685) | comGG | 105041..105367 (+) | 327 | WP_002987787.1 | competence type IV pilus minor pilin ComGG | - |
| PVK53_RS00695 (PVK53_00690) | comGH | 105465..106418 (+) | 954 | WP_002987790.1 | class I SAM-dependent methyltransferase | Machinery gene |
| PVK53_RS00700 (PVK53_00695) | - | 106477..107673 (+) | 1197 | WP_002987791.1 | acetate kinase | - |
| PVK53_RS00705 (PVK53_00700) | - | 107860..108168 (+) | 309 | WP_011284425.1 | hypothetical protein | - |
| PVK53_RS00710 (PVK53_00705) | proC | 108251..109021 (-) | 771 | WP_002986527.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10672.62 Da Isoelectric Point: 8.9043
>NTDB_id=721792 PVK53_RS00680 WP_002987779.1 104346..104630(+) (comGE) [Streptococcus pyogenes strain 20203206]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=721792 PVK53_RS00680 WP_002987779.1 104346..104630(+) (comGE) [Streptococcus pyogenes strain 20203206]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATTGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATTGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |