Detailed information NTG0721667

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NXY85_RS09040
• Genome accession: NZ_CP103290
• Coordinates: 1745594..1747987 (-)
• Length: 797 a.a.
• NCBI ID: WP_151290389.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain NS2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1740594..1752987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NXY85_RS09005	-	1741652..1742380 (+)	729	WP_061572700.1	amino acid ABC transporter ATP-binding protein	-
NXY85_RS09010	-	1742403..1743230 (+)	828	WP_374115532.1	transporter substrate-binding domain-containing protein	-
NXY85_RS09015	-	1743292..1743942 (+)	651	WP_010789323.1	amino acid ABC transporter permease	-
NXY85_RS09020	-	1743961..1744617 (+)	657	WP_258729631.1	amino acid ABC transporter permease	-
NXY85_RS09025	-	1744654..1744785 (-)	132	WP_003325315.1	YrzQ family protein	-
NXY85_RS09030	-	1744810..1745001 (-)	192	WP_003325314.1	hypothetical protein	-
NXY85_RS09035	-	1745014..1745478 (-)	465	WP_061572696.1	PRC-barrel domain-containing protein	-
NXY85_RS09040	recD2	1745594..1747987 (-)	2394	WP_151290389.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NXY85_RS09045	-	1748021..1748641 (-)	621	WP_151291306.1	tetratricopeptide repeat protein	-
NXY85_RS09050	mnmA	1748732..1749847 (-)	1116	WP_258729632.1	tRNA 2-thiouridine(34) synthase MnmA	-
NXY85_RS09055	-	1749881..1751023 (-)	1143	WP_010789328.1	cysteine desulfurase family protein	-
NXY85_RS09060	cymR	1751042..1751458 (-)	417	WP_010789329.1	cysteine metabolism transcriptional regulator CymR	-
NXY85_RS09065	-	1751660..1752961 (+)	1302	WP_258729633.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89190.85 Da
• Isoelectric Point: 5.0736

>NTDB_id=721667 NXY85_RS09040 WP_151290389.1 1745594..1747987(-) (recD2) [Bacillus atrophaeus strain NS2]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSDGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELIALQKELPFSVYDANIGMEGITPFDFMKEEHS

Nucleotide

• Length: 2394 bp

>NTDB_id=721667 NXY85_RS09040 WP_151290389.1 1745594..1747987(-) (recD2) [Bacillus atrophaeus strain NS2]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTTTTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTC
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTAAAAAAACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGAAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGGCATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
CGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATTGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCTTTATATTACGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATTGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTCGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTTCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CCGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCAGATTATAAAAAAGATGAA
GTTTTTCCGTTTGTTTTGGCCGCACCGACAGGAAGAGCCGCAAAACGAATGAGTGAATCGACCGGACTTCCGGCCGTCAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTGGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCGCAGGTCATTCC
GACAGTCAGGCTGACAGATATTTACCGGCAGGCAGAAGGTTCATCTATTGTGGAGCTTGCTCACGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCACCCACCAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTC
GAAAAGGTCGTCACCAATGCGTTGAAAAAGGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTTG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACTTTCACCAAAAAAGACTTCAGCCAGTTTACGCACGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACCCTGCAGGCTGAGGAAATGGATGAAGAACTTATAGCTCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACGCCATTTGATTTTATGAAAGAAGAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	91.97	100	0.92