Detailed information NTG0719615

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PBV52_RS36650
• Genome accession: NZ_CP117866
• Coordinates: 8148879..8149913 (+)
• Length: 344 a.a.
• NCBI ID: WP_274244480.1
• Uniprot ID: -
• Organism: Streptomyces sp. T12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 8143879..8154913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PBV52_RS36635 (PBV52_36635)	-	8144737..8145699 (+)	963	WP_274244475.1	carbohydrate kinase	-
PBV52_RS36640 (PBV52_36640)	-	8145927..8148485 (+)	2559	WP_274244477.1	GH32 C-terminal domain-containing protein	-
PBV52_RS36645 (PBV52_36645)	-	8148501..8148794 (+)	294	WP_274244479.1	putative quinol monooxygenase	-
PBV52_RS36650 (PBV52_36650)	cytR	8148879..8149913 (+)	1035	WP_274244480.1	LacI family DNA-binding transcriptional regulator	Regulator
PBV52_RS36655 (PBV52_36655)	-	8150008..8150130 (+)	123	WP_274244483.1	hypothetical protein	-
PBV52_RS36660 (PBV52_36660)	-	8150148..8150999 (-)	852	WP_274244485.1	aldo/keto reductase	-
PBV52_RS36665 (PBV52_36665)	-	8151030..8151359 (-)	330	Protein_7258	IMP dehydrogenase	-
PBV52_RS36670 (PBV52_36670)	-	8151350..8151481 (-)	132	Protein_7259	aldo/keto reductase	-
PBV52_RS36675 (PBV52_36675)	-	8151600..8151857 (-)	258	WP_373921952.1	hypothetical protein	-
PBV52_RS36680 (PBV52_36680)	-	8152039..8152913 (+)	875	Protein_7261	helix-turn-helix transcriptional regulator	-
PBV52_RS36685 (PBV52_36685)	-	8153179..8153817 (+)	639	WP_274249802.1	phosphatase PAP2 family protein	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 36752.09 Da
• Isoelectric Point: 6.0427

>NTDB_id=719615 PBV52_RS36650 WP_274244480.1 8148879..8149913(+) (cytR) [Streptomyces sp. T12]
MGRRIGIKDVAEAAGVSVTTVSHILNEAEGKRINPETRQRVLETAQRLGYAPNGLARGLRLKRSSTVGFVSDRIATTPFA
GQIILGAQEEAAKHDLLLLLLNTGGDPELERKEIELLLQRQVDGVLYASMYHRVVEVPEQLRSVPTVLLDARADDPAVPS
VVPDEVQGGYTAVHELLRHGHRRIGFLNNVDNIPATHGRLAGYRQALAEAGVAFDPGLVVTETSDAAGGYRAALGLLQAA
ERPTALFCFTDRMAMGAYHAAAQLGLSIPADLSVIGFDNQELICDGMFPGLTTVALPHYEMGARAVVQLLALTGAPDRET
GPVAQEMLPCPLVARASVASPPRL

Nucleotide

• Length: 1035 bp

>NTDB_id=719615 PBV52_RS36650 WP_274244480.1 8148879..8149913(+) (cytR) [Streptomyces sp. T12]
ATGGGCAGGCGGATCGGGATCAAGGACGTGGCGGAAGCCGCCGGAGTCTCGGTCACGACCGTTTCCCACATCCTCAACGA
GGCCGAGGGCAAGCGCATCAACCCCGAGACCCGGCAGCGCGTCCTGGAGACGGCCCAGCGGCTGGGGTACGCGCCCAACG
GTCTGGCCCGTGGCCTGCGGCTGAAGCGGTCGAGCACCGTCGGCTTCGTCAGCGACCGGATCGCCACCACCCCCTTCGCC
GGCCAGATCATCCTGGGAGCCCAGGAAGAGGCGGCCAAGCACGACCTGCTGTTGCTGTTGCTGAACACCGGCGGAGACCC
GGAGCTGGAGCGCAAGGAGATCGAACTGCTGCTCCAGCGCCAGGTCGACGGGGTGCTGTACGCGTCGATGTACCACCGGG
TCGTGGAGGTGCCGGAGCAGTTGCGCTCGGTCCCCACGGTTCTGCTCGACGCACGCGCGGACGACCCCGCCGTCCCGTCG
GTGGTGCCGGACGAGGTCCAGGGCGGCTACACCGCCGTACACGAACTGCTCCGGCACGGCCACCGCCGTATCGGCTTCCT
CAACAACGTCGACAACATCCCGGCCACCCACGGGCGGCTGGCCGGCTACCGCCAGGCCCTCGCGGAAGCAGGTGTCGCCT
TCGATCCCGGGCTGGTGGTGACCGAGACCTCCGACGCGGCGGGCGGCTACCGGGCGGCACTCGGGCTGCTGCAGGCGGCG
GAGCGGCCCACCGCGCTGTTCTGCTTCACCGACCGGATGGCGATGGGCGCCTACCACGCCGCCGCCCAGCTGGGGCTGTC
GATCCCGGCCGATCTGTCGGTCATCGGTTTCGACAACCAGGAACTGATCTGCGACGGCATGTTCCCAGGGCTGACCACCG
TCGCCCTGCCGCACTACGAGATGGGGGCGCGAGCCGTCGTACAACTGCTCGCGCTCACGGGCGCCCCGGACCGGGAGACT
GGTCCGGTTGCCCAGGAAATGCTGCCGTGCCCGCTGGTGGCACGGGCATCGGTCGCTTCGCCGCCCCGACTCTGA

Domains

Predicted by InterProScan.

• Periplasmic binding proteins and sugar binding domain of LacI family (Peripla_BP_1) (66-305)

• Bacterial regulatory proteins, lacI family (LacI) (7-53)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	37.059	98.837	0.366