Detailed information NTG0719084

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NV349_RS15500
• Genome accession: NZ_CP102798
• Coordinates: 3165089..3167521 (-)
• Length: 810 a.a.
• NCBI ID: WP_058844063.1
• Uniprot ID: -
• Organism: Lysinibacillus sp. OF-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3160089..3172521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NV349_RS15490 (NV349_15490)	-	3162083..3163048 (-)	966	WP_036124338.1	magnesium transporter CorA family protein	-
NV349_RS15495 (NV349_15495)	hpaB	3163518..3164951 (-)	1434	WP_271910489.1	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	-
NV349_RS15500 (NV349_15500)	recD2	3165089..3167521 (-)	2433	WP_058844063.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NV349_RS15505 (NV349_15505)	hisA	3167710..3168477 (+)	768	WP_271910490.1	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	-
NV349_RS15510 (NV349_15510)	-	3168474..3168761 (+)	288	WP_036124345.1	hypothetical protein	-
NV349_RS15515 (NV349_15515)	-	3169093..3169731 (+)	639	WP_271910491.1	hypothetical protein	-
NV349_RS15520 (NV349_15520)	-	3169748..3170470 (+)	723	WP_036124348.1	GTP pyrophosphokinase family protein	-
NV349_RS15525 (NV349_15525)	-	3170614..3172056 (-)	1443	WP_101966500.1	MDR family MFS transporter	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 90794.12 Da
• Isoelectric Point: 4.9167

>NTDB_id=719084 NV349_RS15500 WP_058844063.1 3165089..3167521(-) (recD2) [Lysinibacillus sp. OF-1]
MTDHLDLFELNKFFILGRPIVSIFHNAQNMYSIVRVKIQETNLQYEDKEIIVVGYFPPLQMDEQYRFTGILKQHPKYGAQ
FQIETFTKEVPATEQGIIHYLSSDLFVGIGKKTAETIVEKLGANALRVILEDPSALDAVPRLSTEKKEVIHRTIEQNLGL
ERVMIQLNEWGFGPQLGMKIYQTYRTEAIELLTENPYRLIEDVEGVGFFRADELGAKLGITGKHPDRVKAAIFHVLNTAA
LSDGHVYLDAEHVLPLVKDMLQQSQRQEIPFEDISKACIELREEGKICGEETRLYLPSLYFSEVGIASKIVSLIERNNKA
EHFSKDEIRKAIGETEELLNVTYAETQANAIEQALNSAVMILTGGPGTGKTTVVRGVVEVYAKLHGLSLNPKEYAQKEEP
FPIILCAPTGRAAKRLAESTELPAMTIHRLLGFTGQEKEEETEREVTGKLIIVDEMSMVDTWLAHQLLKALHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASKQLPTVELTDVYRQAEGSTIIELAHQIKKGTIPNDLTAKTSDRSFIKASADQVANVVTQ
VVKSAVAKGQEIRNIQVLAPMYKGTAGIDNLNKMIQELINPNDTGTRKELVFGDVTYRIKDKVLQLVNQPESNVFNGDMG
EVISIIKAKETIEKQDLLIVSFDGIEVTYQRSDLNQLTLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRRNLLYTGITRA
KNFLILCGEPDVLADGLQRTDDLQRFTSLRARLNPMDINEEIVEVEAMSIEEQELNNPVSIAQKLTVETAPYIHPMIGMN
DISPYDFLND

Nucleotide

• Length: 2433 bp

>NTDB_id=719084 NV349_RS15500 WP_058844063.1 3165089..3167521(-) (recD2) [Lysinibacillus sp. OF-1]
ATGACCGATCATCTAGATTTATTTGAACTCAATAAATTCTTTATACTCGGACGTCCAATCGTCTCTATCTTTCATAATGC
ACAAAATATGTATTCGATTGTACGTGTGAAAATACAAGAGACGAACTTACAATATGAAGATAAAGAAATTATCGTTGTTG
GTTATTTTCCACCATTACAAATGGATGAACAATATCGTTTTACGGGTATCTTAAAACAGCATCCTAAATATGGTGCTCAA
TTTCAAATCGAGACATTTACGAAAGAGGTTCCTGCAACTGAGCAAGGGATTATTCATTATTTATCTAGTGACTTATTTGT
AGGAATTGGGAAAAAAACGGCTGAAACGATTGTAGAAAAACTAGGGGCTAATGCTCTTCGTGTTATTTTAGAAGATCCTA
GTGCACTTGACGCCGTTCCACGCTTATCCACTGAAAAAAAAGAAGTTATTCATCGCACCATCGAACAAAATCTAGGCCTA
GAACGTGTGATGATTCAACTGAATGAGTGGGGCTTTGGTCCACAGCTCGGTATGAAAATCTATCAAACCTATCGAACTGA
AGCCATAGAATTACTAACTGAAAATCCATATCGCTTGATCGAAGATGTTGAAGGCGTTGGTTTCTTTCGGGCTGACGAAT
TAGGGGCTAAACTAGGAATTACTGGTAAACATCCTGATCGTGTCAAAGCAGCGATATTTCATGTGTTAAATACAGCTGCT
TTATCAGATGGACACGTCTATTTAGATGCGGAGCATGTCCTACCGCTTGTAAAGGATATGCTTCAACAAAGTCAGCGGCA
GGAGATCCCGTTTGAGGACATTTCTAAAGCCTGTATTGAGCTACGTGAAGAAGGTAAAATTTGTGGTGAAGAAACTAGAT
TATATTTACCATCCCTTTATTTTTCTGAAGTAGGGATTGCCTCTAAAATCGTATCGCTCATTGAGCGAAATAATAAGGCT
GAGCATTTTAGTAAGGACGAAATTAGAAAAGCCATTGGAGAAACAGAGGAGCTACTCAATGTCACCTACGCTGAGACACA
AGCAAATGCTATTGAACAGGCTTTAAATTCAGCCGTCATGATTTTGACAGGTGGACCGGGTACTGGAAAAACAACGGTTG
TACGTGGAGTGGTTGAAGTTTATGCAAAGCTACATGGTTTATCATTAAATCCAAAAGAATATGCTCAAAAAGAAGAACCA
TTTCCTATCATCCTTTGTGCACCAACTGGACGTGCTGCCAAGCGGTTAGCTGAATCAACTGAGCTTCCTGCAATGACCAT
TCATCGTCTACTTGGCTTTACAGGGCAAGAAAAAGAGGAAGAAACAGAGCGTGAGGTAACAGGAAAGCTCATCATTGTGG
ATGAAATGTCTATGGTGGATACATGGCTTGCCCATCAGTTATTAAAAGCTTTACATGAAGATGTCCAGGTTGTTTTTGTA
GGGGACCAGGACCAGCTTCCACCAGTAGGGCCAGGACAGGTGTTAAAGGATTTATTAGCATCAAAGCAACTGCCAACTGT
TGAACTAACAGATGTTTATCGACAAGCAGAGGGCTCTACAATTATTGAGCTTGCCCATCAAATTAAAAAGGGAACGATTC
CAAATGATTTAACAGCTAAAACATCTGATCGTTCGTTTATAAAGGCTTCAGCCGATCAAGTTGCCAATGTTGTCACGCAG
GTTGTCAAAAGTGCAGTAGCCAAAGGACAGGAAATTCGCAATATTCAGGTGCTAGCACCCATGTATAAAGGTACGGCTGG
TATTGATAATTTAAATAAAATGATTCAAGAGCTCATTAATCCAAATGATACGGGAACAAGAAAAGAGCTGGTCTTTGGTG
ATGTGACTTATCGCATAAAAGATAAAGTACTTCAGCTGGTCAATCAACCTGAGAGCAATGTTTTTAACGGGGATATGGGC
GAGGTCATCAGTATTATTAAAGCAAAAGAAACGATCGAAAAACAGGACTTACTGATCGTATCCTTTGATGGTATCGAGGT
AACTTATCAACGCAGTGATTTGAACCAATTGACACTAGCCTATTGCTGCTCTATTCATAAATCTCAAGGCTCTGAGTTTC
AAACAGTTATTATGCCAGTTGTCAGAGGATATTCAAAAATGCTGCGGCGTAATCTCTTATACACAGGGATTACTCGTGCT
AAAAACTTTTTGATTTTATGTGGTGAACCCGATGTACTTGCAGATGGCTTACAGCGTACAGATGACCTACAGCGTTTCAC
TTCTTTACGTGCAAGACTTAATCCGATGGATATCAATGAAGAAATTGTGGAAGTAGAGGCTATGTCAATAGAGGAGCAGG
AGTTGAACAATCCCGTCTCCATAGCACAAAAGCTAACAGTAGAAACAGCACCATATATTCATCCAATGATTGGGATGAAT
GATATCTCCCCTTATGATTTTTTAAATGACTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-727)

• AAA domain (AAA_30) (343-550)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-660)

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	52.27	100	0.526