Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MOP79_RS07035 Genome accession   NZ_CP102583
Coordinates   1380695..1381678 (+) Length   327 a.a.
NCBI ID   WP_230738456.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain D39Mega17545     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1375695..1386678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOP79_RS07010 - 1375776..1376186 (+) 411 WP_000595757.1 hypothetical protein -
  MOP79_RS07015 ply 1376197..1377612 (+) 1416 WP_001284359.1 cholesterol-dependent cytolysin pneumolysin -
  MOP79_RS07020 - 1378493..1379209 (+) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  MOP79_RS07025 - 1379333..1379802 (+) 470 Protein_1393 MarR family winged helix-turn-helix transcriptional regulator -
  MOP79_RS07030 - 1379819..1380640 (+) 822 Protein_1394 ABC transporter permease -
  MOP79_RS07035 rcrQ 1380695..1381678 (+) 984 WP_230738456.1 ABC transporter ATP-binding protein Regulator
  MOP79_RS07040 - 1381744..1382106 (+) 363 WP_000078805.1 DUF2200 domain-containing protein -
  MOP79_RS07045 - 1382103..1382606 (+) 504 WP_000800927.1 phosphatase PAP2 family protein -
  MOP79_RS07050 - 1382720..1383166 (+) 447 WP_000776587.1 LytTR family DNA-binding domain-containing protein -
  MOP79_RS07055 - 1383172..1383294 (+) 123 WP_257857867.1 hypothetical protein -
  MOP79_RS07060 - 1383340..1384422 (+) 1083 WP_033875256.1 alkanal monooxygenase -
  MOP79_RS07065 - 1384443..1385426 (+) 984 WP_033875255.1 alkanal monooxygenase -

Sequence

Protein


Download         Length: 327 a.a.        Molecular weight: 36082.79 Da        Isoelectric Point: 4.3856

>NTDB_id=717880 MOP79_RS07035 WP_230738456.1 1380695..1381678(+) (rcrQ) [Streptococcus pneumoniae strain D39Mega17545]
MVSAKRINQVLDLHSSIQNPVQVQLTDENFKGQVEFKDVTFRYAANSEAVIEHVSFKAETGQTVAFIGSTGSGKSTLVNL
IPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGSIRIDGVDTKAMTRSEVHDA
FSMVLQDTWLFEGTIRDNLIYNQIGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTLSVGQKQLLTIACALLKDAS
LLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGNYEELMAQGGFYADLYNSQF
TEDEAEE

Nucleotide


Download         Length: 984 bp        

>NTDB_id=717880 MOP79_RS07035 WP_230738456.1 1380695..1381678(+) (rcrQ) [Streptococcus pneumoniae strain D39Mega17545]
ATGGTCTCTGCTAAGCGGATTAATCAAGTTTTAGATTTGCATTCTTCTATCCAAAACCCTGTTCAAGTGCAGCTGACTGA
TGAAAACTTCAAAGGTCAGGTCGAGTTTAAGGATGTGACCTTCCGCTATGCGGCAAATTCGGAGGCAGTTATTGAACATG
TTAGCTTTAAAGCAGAAACTGGTCAAACAGTGGCCTTTATTGGGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTG
ATTCCACGTTTCTACGACGTGTCAGCAGGAGAAATTCTGGTGGACGGTGTCAATGTTCAAGACTATGACTTCTCTGCGAC
AGCTCATGCTGGTCAAAAGGTTGCCATTGTTGGGCCGACTGGGGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAAT
TCTATGAGATTGATAAGGGAAGTATTCGCATTGATGGTGTGGATACCAAGGCTATGACGCGTTCAGAAGTGCATGATGCC
TTTTCAATGGTCTTGCAGGATACCTGGCTCTTTGAAGGAACTATTCGAGACAATCTCATCTATAATCAAATAGGGATTAG
TGATGAACGAATGATGGAAGCTAGTAAGGCTGTGGGAATTCACCACTTTATTATGACCTTGCCAGATGGCTATGATACCA
TCTTGGATGACACCGTGACCTTGTCTGTAGGACAAAAACAACTATTGACTATTGCTTGTGCCCTTCTTAAGGATGCATCG
CTTTTGATTTTGGATGAGGCGACTTCTTCTGTTGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGAT
GGAAGGACGCACATCCTTTGTCATTGCCCACCGCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATG
GAAATATCATCGAGCAAGGCAACTATGAGGAACTGATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTT
ACAGAAGATGAAGCAGAAGAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(104-249)

ABC transporter (ABC_tran)

(52-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

80.357

68.502

0.55