Detailed information NTG0717807

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: NUX13_RS10025
• Genome accession: NZ_CP102580
• Coordinates: 2129496..2130197 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain A9844
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2124496..2135197

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NUX13_RS09995 (NUX13_09995)	-	2124803..2125246 (-)	444	WP_001246673.1	SRPBCC family protein	-
NUX13_RS10000 (NUX13_10000)	tadA	2125316..2125819 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
NUX13_RS10005 (NUX13_10005)	-	2125826..2126950 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
NUX13_RS10010 (NUX13_10010)	ung	2126947..2127660 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
NUX13_RS10015 (NUX13_10015)	-	2127711..2128307 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
NUX13_RS10020 (NUX13_10020)	gspK	2128537..2129496 (-)	960	WP_000301460.1	type II secretion system minor pseudopilin GspK	-
NUX13_RS10025 (NUX13_10025)	xcpW	2129496..2130197 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
NUX13_RS10030 (NUX13_10030)	xcpV	2130197..2130577 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
NUX13_RS10035 (NUX13_10035)	-	2130567..2131121 (-)	555	WP_000841367.1	type II secretion system protein	-
NUX13_RS10040 (NUX13_10040)	-	2131131..2131739 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
NUX13_RS10045 (NUX13_10045)	-	2131777..2132550 (-)	774	WP_000497302.1	TatD family hydrolase	-
NUX13_RS10050 (NUX13_10050)	-	2132568..2132909 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
NUX13_RS10055 (NUX13_10055)	-	2132921..2133901 (-)	981	WP_001075413.1	DNA polymerase III subunit delta'	-
NUX13_RS10060 (NUX13_10060)	kdsB	2133913..2134674 (-)	762	WP_000680703.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=717807 NUX13_RS10025 WP_000594572.1 2129496..2130197(-) (xcpW) [Acinetobacter baumannii strain A9844]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=717807 NUX13_RS10025 WP_000594572.1 2129496..2130197(-) (xcpW) [Acinetobacter baumannii strain A9844]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991