Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | D5070_RS08440 | Genome accession | NZ_AP018923 |
| Coordinates | 1659172..1659471 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain JMUB3031 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1654172..1664471
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5070_RS08415 (JMUB3031_1581) | gcvPA | 1655384..1656730 (-) | 1347 | WP_117200971.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| D5070_RS08420 (JMUB3031_1582) | gcvT | 1656750..1657841 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| D5070_RS08425 (JMUB3031_1583) | - | 1658000..1658524 (-) | 525 | WP_001015121.1 | shikimate kinase | - |
| D5070_RS08430 | - | 1658514..1658660 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| D5070_RS08435 (JMUB3031_1584) | comGF | 1658757..1659254 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| D5070_RS08440 (JMUB3031_1585) | comGE | 1659172..1659471 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| D5070_RS08445 (JMUB3031_1586) | comGD | 1659458..1659904 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| D5070_RS08450 (JMUB3031_1587) | comGC | 1659882..1660193 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| D5070_RS08455 (JMUB3031_1588) | comGB | 1660207..1661277 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| D5070_RS08460 (JMUB3031_1589) | comGA | 1661249..1662223 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| D5070_RS08465 (JMUB3031_1590) | - | 1662275..1662898 (-) | 624 | WP_001223010.1 | MBL fold metallo-hydrolase | - |
| D5070_RS08470 (JMUB3031_1591) | - | 1662895..1663224 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| D5070_RS08475 (JMUB3031_1592) | - | 1663224..1664210 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| D5070_RS08480 (JMUB3031_1593) | - | 1664207..1664410 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=71678 D5070_RS08440 WP_000844413.1 1659172..1659471(-) (comGE) [Staphylococcus aureus strain JMUB3031]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=71678 D5070_RS08440 WP_000844413.1 1659172..1659471(-) (comGE) [Staphylococcus aureus strain JMUB3031]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |