Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   NQ508_RS09395 Genome accession   NZ_CP102280
Coordinates   1970892..1972706 (-) Length   604 a.a.
NCBI ID   WP_006428983.1    Uniprot ID   A6BGT3
Organism   Dorea longicatena strain DSM 13814     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1965892..1977706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQ508_RS09375 (NQ508_09375) - 1967434..1968660 (+) 1227 WP_006428979.1 argininosuccinate synthase -
  NQ508_RS09380 (NQ508_09380) - 1968716..1969678 (-) 963 WP_006428980.1 dipeptidase -
  NQ508_RS09385 (NQ508_09385) - 1969960..1970142 (+) 183 WP_006428981.1 hypothetical protein -
  NQ508_RS09390 (NQ508_09390) - 1970158..1970415 (+) 258 WP_044920823.1 spore coat protein -
  NQ508_RS09395 (NQ508_09395) rcrQ 1970892..1972706 (-) 1815 WP_006428983.1 ABC transporter ATP-binding protein Regulator
  NQ508_RS09400 (NQ508_09400) - 1972708..1975155 (-) 2448 WP_006428984.1 ABC transporter ATP-binding protein -
  NQ508_RS09405 (NQ508_09405) - 1975202..1975699 (-) 498 WP_237998694.1 MarR family winged helix-turn-helix transcriptional regulator -
  NQ508_RS09410 (NQ508_09410) dtd 1975886..1976332 (-) 447 WP_006428986.1 D-aminoacyl-tRNA deacylase -
  NQ508_RS09415 (NQ508_09415) - 1976348..1977223 (-) 876 WP_044920826.1 DMT family transporter -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67366.86 Da        Isoelectric Point: 7.1144

>NTDB_id=715807 NQ508_RS09395 WP_006428983.1 1970892..1972706(-) (rcrQ) [Dorea longicatena strain DSM 13814]
MPRGRGRGPQMSNEKAKDFKGTMKKLMAYLSAYKIGIFFVIVFAIGSTIFNIVGPKILGKATTEIFKGLVRKVSGGSGID
FDKIAHIVLTLLCLYLTSAVFSFVQGYIMTGVSQKLTYRLRKEISEKINRLPMNYFDKQTHGEVLSRITNDVDTLSQSLN
QSATQVITSTTTIIGVLIMMLSISPLMTVVALLILPVSMGLISVIVKRSQKYFMSQQEYLGHVNGQVEEIYGGHNIIKAF
NKEEDVIATFKRDNDILYTSAWKSQFLSGMMMPIMQFVGNLGYVGEVILGGYLAMKGTIQVGDIQSFIQYVRSFTMPIQQ
VAQVANMLQSTAAASERVFEFLEEKEEDQTVENPVCIDKLEGSVSFDHVHFGYNPDHTIINDFSVDVKPGQKVAIVGPTG
AGKTTMIKLLMRFYDVGSGSIKVDGHDVRDFNRDDLRKMFGMVLQDTWLFKGSIEDNIRYGRLDATHEEVVEAAKAARAH
RFIKTLPGGYQMELNEEASNVSQGQKQLLTIARAMLADPKILILDEATSSVDTRTEIQIQKAMDQLMKGRTSFVIAHRLS
TIRDADVILVMKDGDIVEQGNHEELLAQNGFYAELYNSQFERSA

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=715807 NQ508_RS09395 WP_006428983.1 1970892..1972706(-) (rcrQ) [Dorea longicatena strain DSM 13814]
ATGCCAAGAGGTAGAGGACGTGGACCACAGATGTCAAATGAAAAGGCAAAAGATTTTAAAGGCACAATGAAAAAGCTGAT
GGCATATTTGAGCGCATATAAGATTGGAATATTCTTTGTAATCGTATTTGCTATCGGAAGTACGATATTCAATATTGTAG
GACCGAAGATTCTTGGAAAGGCAACGACTGAGATATTTAAAGGACTGGTCAGAAAAGTATCTGGAGGATCCGGAATAGAT
TTTGACAAGATCGCGCATATCGTACTGACGCTGTTATGCCTGTATCTGACAAGTGCGGTATTCTCCTTTGTACAGGGGTA
CATTATGACGGGTGTGTCACAGAAGCTGACGTACCGTCTGAGAAAAGAAATCTCTGAGAAGATCAACCGTCTGCCGATGA
ACTATTTTGATAAGCAGACACATGGTGAAGTATTATCGCGTATTACCAATGATGTAGATACCTTAAGTCAGAGTCTGAAC
CAGAGTGCGACGCAGGTGATCACATCGACGACAACGATCATCGGTGTATTGATCATGATGCTCAGTATCAGCCCGCTGAT
GACCGTAGTAGCACTCCTGATCCTTCCGGTTTCAATGGGACTGATCTCAGTGATCGTGAAACGTTCACAGAAATATTTCA
TGAGTCAGCAGGAATATCTGGGTCATGTAAACGGACAGGTGGAAGAAATCTATGGCGGTCATAATATCATCAAAGCGTTT
AATAAAGAAGAGGATGTAATTGCAACATTCAAGCGTGACAATGATATTCTGTATACATCGGCATGGAAATCGCAGTTCCT
GTCAGGAATGATGATGCCGATCATGCAGTTCGTCGGAAATCTCGGATATGTCGGTGAGGTTATCCTCGGCGGTTACCTTG
CGATGAAAGGTACGATCCAGGTTGGAGATATCCAGTCATTTATTCAGTACGTAAGAAGTTTTACGATGCCGATCCAGCAG
GTTGCACAGGTGGCCAATATGTTACAGTCTACAGCGGCAGCTTCCGAGCGTGTGTTTGAATTCCTTGAGGAGAAGGAAGA
AGACCAGACGGTAGAGAATCCGGTATGTATCGATAAACTGGAAGGAAGCGTAAGCTTCGACCATGTACATTTCGGATATA
ATCCGGATCACACAATCATCAATGACTTCAGTGTGGATGTAAAACCAGGACAGAAGGTTGCAATCGTAGGACCGACCGGT
GCCGGAAAGACGACGATGATCAAATTATTAATGCGTTTCTATGATGTTGGAAGTGGTTCGATCAAAGTAGATGGACATGA
TGTCCGCGACTTTAACCGTGATGACTTAAGAAAAATGTTCGGAATGGTATTACAGGACACCTGGCTGTTCAAGGGAAGCA
TCGAAGATAATATCCGTTATGGACGACTGGATGCAACGCATGAAGAGGTTGTGGAGGCCGCAAAGGCAGCACGTGCACAC
CGCTTTATAAAGACGCTTCCGGGTGGTTATCAGATGGAGTTAAATGAAGAAGCAAGTAACGTATCACAGGGACAGAAACA
GCTCCTGACGATCGCAAGAGCCATGCTGGCAGATCCGAAGATTCTGATTCTTGATGAGGCGACAAGTTCGGTAGATACAA
GAACCGAGATCCAGATCCAGAAGGCGATGGATCAGCTGATGAAAGGAAGAACAAGTTTCGTAATTGCACACCGGCTGTCT
ACGATTCGTGATGCGGATGTGATCCTTGTTATGAAAGACGGGGATATTGTAGAGCAGGGAAATCATGAGGAATTATTAGC
ACAAAATGGATTCTATGCAGAACTGTATAATTCACAATTTGAGAGAAGTGCATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(381-529)

ABC transporter transmembrane region (ABC_membrane)

(37-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A6BGT3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

49.661

97.682

0.485