Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   NQ550_RS15575 Genome accession   NZ_CP102267
Coordinates   3344483..3346321 (-) Length   612 a.a.
NCBI ID   WP_025580798.1    Uniprot ID   -
Organism   Blautia wexlerae DSM 19850     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3339483..3351321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQ550_RS15565 (NQ550_15565) - 3340353..3341498 (-) 1146 WP_025579764.1 hypothetical protein -
  NQ550_RS15570 (NQ550_15570) - 3341819..3343876 (-) 2058 WP_025579762.1 HelD family protein -
  NQ550_RS15575 (NQ550_15575) rcrQ 3344483..3346321 (-) 1839 WP_025580798.1 ABC transporter ATP-binding protein Regulator
  NQ550_RS15580 (NQ550_15580) - 3346318..3348480 (-) 2163 WP_025580799.1 ABC transporter ATP-binding protein -
  NQ550_RS15585 (NQ550_15585) - 3348617..3349084 (-) 468 WP_022381257.1 MarR family winged helix-turn-helix transcriptional regulator -
  NQ550_RS15590 (NQ550_15590) - 3349318..3350220 (-) 903 WP_242833682.1 LysR family transcriptional regulator -

Sequence

Protein


Download         Length: 612 a.a.        Molecular weight: 68845.44 Da        Isoelectric Point: 6.7140

>NTDB_id=715634 NQ550_RS15575 WP_025580798.1 3344483..3346321(-) (rcrQ) [Blautia wexlerae DSM 19850]
MSEQRRRGPMGGHGRMMSGEKAKDFKGSMAKLFRYMGRYKFRFILMFIFAVAGTVFSIVGPKILGKATTELFNGLVAKVN
GTGEIDFGKIGMILLWTLGLYVLSACFSFVQGFVMSGISNDVTYNLRKDISKKINRLPLNYYESRTNGEILSRITNDVDT
LQMSLNQSLTQLITSVTTLIGVFIMMLSINVWMTLAALLILPVSMFIIQTVMKHSQKYFQDQQSYLGKVNGQIEENFGGH
NVVRVFNKENDVVEEFEKDNQKLYESAWKSQFFSGMMMPIMQFVGNLGYVMVALLGGVFVIKKSIEVGDIQSFFQYIRNF
TQPIQQIAQVTNLLQSSAAASERVFEFLEEPEESQNEKNPVDVNTLTGDVQFEHVKFGYNPDKIIINDFSADVKDGQKIA
IVGPTGAGKTTMVKLLMRFYDLNGGSIKVDGYDIKDFNRSSLREMFGMVLQDTWLFSGTIMENIRYGRLDATDEEVIAAA
KAAHVHNFIMQQPGGYDMVLDEETSNISQGQKQLLTIARAILANNKILILDEATSSVDTRTEVRIQKAMDNLMKGRTSFV
IAHRLSTIKDADLILVMKDGDIIEQGNHEELLSKKGFYADLYNSQFENKVTA

Nucleotide


Download         Length: 1839 bp        

>NTDB_id=715634 NQ550_RS15575 WP_025580798.1 3344483..3346321(-) (rcrQ) [Blautia wexlerae DSM 19850]
ATGAGCGAACAGAGAAGAAGAGGTCCTATGGGAGGACATGGACGTATGATGTCCGGCGAAAAGGCAAAAGACTTCAAGGG
CTCCATGGCTAAGCTTTTCCGTTATATGGGACGATATAAATTCCGCTTTATACTGATGTTTATCTTTGCAGTAGCGGGAA
CTGTGTTTAGTATTGTAGGGCCTAAGATTTTAGGTAAGGCGACCACAGAGCTGTTTAACGGCCTGGTTGCCAAGGTAAAC
GGAACCGGTGAAATTGACTTCGGAAAGATCGGGATGATCCTGTTATGGACACTTGGATTATATGTGTTAAGTGCATGCTT
TTCCTTTGTACAGGGATTCGTAATGTCAGGGATCTCCAATGATGTTACCTATAATCTGAGAAAAGATATTTCAAAGAAAA
TCAACAGACTGCCTCTGAACTATTATGAGAGCAGAACAAACGGTGAGATCCTCTCCCGTATCACCAATGATGTGGATACT
CTGCAGATGAGTTTAAACCAGAGTCTGACACAGCTGATCACATCAGTGACAACCCTGATCGGTGTATTTATTATGATGCT
TTCCATCAATGTGTGGATGACTCTTGCAGCACTTCTGATCCTGCCGGTTTCCATGTTCATCATCCAGACTGTCATGAAGC
ATTCCCAGAAATACTTCCAGGACCAGCAGAGCTATCTGGGTAAAGTAAACGGTCAGATCGAAGAAAACTTCGGTGGTCAT
AATGTGGTCCGGGTTTTCAACAAAGAGAATGATGTAGTAGAAGAATTTGAGAAAGATAATCAGAAGCTTTATGAATCTGC
ATGGAAATCTCAGTTCTTCTCAGGAATGATGATGCCGATCATGCAGTTTGTAGGTAACCTTGGATATGTAATGGTAGCTC
TCTTAGGCGGCGTGTTTGTAATCAAAAAAAGTATTGAAGTCGGTGATATCCAGTCCTTCTTCCAGTACATCCGTAACTTT
ACACAGCCAATCCAGCAGATTGCACAGGTTACAAACCTGTTACAGTCCTCAGCAGCAGCTTCCGAACGAGTATTTGAATT
CCTGGAGGAGCCGGAAGAGAGTCAGAATGAGAAGAACCCTGTAGACGTTAATACACTTACAGGAGATGTACAGTTTGAAC
ATGTAAAATTCGGTTACAATCCGGATAAGATCATTATCAATGATTTCTCTGCAGATGTGAAGGATGGCCAGAAGATTGCC
ATTGTAGGTCCCACAGGTGCAGGAAAGACAACTATGGTGAAACTGCTTATGAGATTCTATGATCTCAATGGCGGAAGTAT
TAAGGTAGACGGTTATGACATCAAAGACTTTAACAGAAGTAGTCTGAGAGAGATGTTTGGTATGGTGCTTCAGGATACCT
GGCTGTTCTCAGGAACCATTATGGAAAATATCCGTTACGGACGTCTGGATGCTACAGATGAAGAGGTGATCGCTGCAGCA
AAGGCAGCCCATGTGCACAACTTTATCATGCAGCAGCCGGGCGGCTATGACATGGTTCTGGATGAAGAAACCAGTAATAT
TTCCCAGGGACAGAAACAGCTTCTCACTATTGCCAGGGCAATTCTTGCCAATAATAAGATCCTGATCCTGGATGAGGCAA
CCTCCTCTGTAGATACCAGAACCGAAGTGCGTATCCAGAAAGCCATGGACAATCTGATGAAGGGCAGAACCAGCTTTGTG
ATCGCACACAGACTTTCTACCATCAAGGATGCAGATCTGATCCTGGTTATGAAAGACGGTGACATTATCGAGCAGGGAAA
TCATGAAGAGCTTCTGTCTAAGAAAGGCTTCTATGCAGACCTGTATAACAGTCAGTTTGAGAATAAGGTAACTGCCTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(387-535)

ABC transporter transmembrane region (ABC_membrane)

(43-323)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.531

96.078

0.495