Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | NQZ92_RS00820 | Genome accession | NZ_CP102143 |
| Coordinates | 126138..127091 (+) | Length | 317 a.a. |
| NCBI ID | WP_002936545.1 | Uniprot ID | A0A0Z8FFJ3 |
| Organism | Streptococcus suis strain DNR43 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 121138..132091
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ92_RS00780 (NQZ92_00780) | - | 121401..122351 (-) | 951 | WP_014636751.1 | S66 peptidase family protein | - |
| NQZ92_RS00785 (NQZ92_00785) | comYA | 122437..123387 (+) | 951 | WP_002936562.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NQZ92_RS00790 (NQZ92_00790) | comYB | 123299..124336 (+) | 1038 | WP_255195823.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NQZ92_RS00795 (NQZ92_00795) | comYC | 124338..124619 (+) | 282 | WP_002936550.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NQZ92_RS00800 (NQZ92_00800) | comGD | 124600..125007 (+) | 408 | WP_014636753.1 | competence type IV pilus minor pilin ComGD | - |
| NQZ92_RS00805 (NQZ92_00805) | comYE | 124979..125272 (+) | 294 | WP_002936548.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| NQZ92_RS00810 (NQZ92_00810) | comGF/cglF | 125259..125693 (+) | 435 | WP_002936547.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NQZ92_RS00815 (NQZ92_00815) | comGG | 125671..126081 (+) | 411 | WP_002936546.1 | competence type IV pilus minor pilin ComGG | - |
| NQZ92_RS00820 (NQZ92_00820) | comYH | 126138..127091 (+) | 954 | WP_002936545.1 | class I SAM-dependent methyltransferase | Machinery gene |
| NQZ92_RS00825 (NQZ92_00825) | - | 127141..128328 (+) | 1188 | WP_002936543.1 | acetate kinase | - |
| NQZ92_RS00830 (NQZ92_00830) | - | 128643..129194 (+) | 552 | WP_226960615.1 | folate family ECF transporter S component | - |
| NQZ92_RS00835 (NQZ92_00835) | - | 129248..130504 (+) | 1257 | WP_002936539.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| NQZ92_RS00840 (NQZ92_00840) | pepA | 130549..131610 (-) | 1062 | WP_002936538.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35731.76 Da Isoelectric Point: 4.3950
>NTDB_id=714883 NQZ92_RS00820 WP_002936545.1 126138..127091(+) (comYH) [Streptococcus suis strain DNR43]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKDLDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKDLDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=714883 NQZ92_RS00820 WP_002936545.1 126138..127091(+) (comYH) [Streptococcus suis strain DNR43]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACCATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTAGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTTAACGCCAGTCAGAAAG
ACTTGGACTATCTGGGGATTGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGGTCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACCATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTAGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTTAACGCCAGTCAGAAAG
ACTTGGACTATCTGGGGATTGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGGTCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.443 |
99.685 |
0.603 |
| comYH | Streptococcus mutans UA159 |
60.127 |
99.685 |
0.599 |