Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | K6J59_RS00275 | Genome accession | NZ_AP018782 |
| Coordinates | 57699..58211 (-) | Length | 170 a.a. |
| NCBI ID | WP_005648034.1 | Uniprot ID | A0A2X1QPL8 |
| Organism | Haemophilus influenzae strain CHBN-V-2 isolate 13H37 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 52699..63211
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J59_RS00260 (CHBNV2_00520) | comQ | 56005..56292 (-) | 288 | WP_005648029.1 | DUF5374 domain-containing protein | Machinery gene |
| K6J59_RS00265 (CHBNV2_00530) | comP | 56285..56968 (-) | 684 | WP_005648030.1 | DUF2572 family protein | Machinery gene |
| K6J59_RS00270 (CHBNV2_00540) | comO | 56983..57699 (-) | 717 | WP_005648032.1 | type II secretion system protein J | Machinery gene |
| K6J59_RS00275 (CHBNV2_00550) | comN | 57699..58211 (-) | 513 | WP_005648034.1 | type II secretion system protein | Machinery gene |
| K6J59_RS00280 (CHBNV2_00560) | suhB | 58411..59214 (+) | 804 | WP_005648036.1 | inositol-1-monophosphatase | - |
| K6J59_RS00285 (CHBNV2_00570) | nrfE | 59323..61230 (+) | 1908 | WP_005666026.1 | heme lyase NrfEFG subunit NrfE | - |
| K6J59_RS00290 (CHBNV2_00580) | - | 61230..61760 (+) | 531 | WP_005666027.1 | DsbE family thiol:disulfide interchange protein | - |
| K6J59_RS00295 (CHBNV2_00590) | nrfF | 61757..62914 (+) | 1158 | WP_005666028.1 | heme lyase NrfEFG subunit NrfF | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19850.04 Da Isoelectric Point: 8.4863
>NTDB_id=71338 K6J59_RS00275 WP_005648034.1 57699..58211(-) (comN) [Haemophilus influenzae strain CHBN-V-2 isolate 13H37]
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPEEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPEEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
Nucleotide
Download Length: 513 bp
>NTDB_id=71338 K6J59_RS00275 WP_005648034.1 57699..58211(-) (comN) [Haemophilus influenzae strain CHBN-V-2 isolate 13H37]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAAGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACAGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGGAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAAGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACAGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGGAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
98.824 |
100 |
0.988 |