Detailed information NTG0713063

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: NP432_RS06125
• Genome accession: NZ_CP101931
• Coordinates: 1176973..1177926 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain BGSC b98af
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1171973..1182926

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NP432_RS06100 (NP432_06100)	argF	1173806..1174765 (+)	960	WP_088325579.1	ornithine carbamoyltransferase	-
NP432_RS06105 (NP432_06105)	yjzC	1174851..1175030 (+)	180	WP_003245356.1	YjzC family protein	-
NP432_RS06110 (NP432_06110)	yjzD	1175076..1175261 (-)	186	WP_003245236.1	YjzD family protein	-
NP432_RS06115 (NP432_06115)	-	1175510..1176244 (+)	735	WP_003245223.1	hypothetical protein	-
NP432_RS06120 (NP432_06120)	-	1176326..1176883 (+)	558	WP_015252365.1	hypothetical protein	-
NP432_RS06125 (NP432_06125)	med	1176973..1177926 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
NP432_RS06130 (NP432_06130)	comZ	1177941..1178132 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
NP432_RS06135 (NP432_06135)	yjzB	1178162..1178401 (-)	240	WP_003232972.1	spore coat protein YjzB	-
NP432_RS06140 (NP432_06140)	fabH	1178566..1179504 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
NP432_RS06145 (NP432_06145)	fabF	1179527..1180768 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
NP432_RS06150 (NP432_06150)	yjaZ	1180844..1181629 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
NP432_RS06155 (NP432_06155)	appD	1181821..1182807 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=713063 NP432_RS06125 WP_014476425.1 1176973..1177926(+) (med) [Bacillus subtilis strain BGSC b98af]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=713063 NP432_RS06125 WP_014476425.1 1176973..1177926(+) (med) [Bacillus subtilis strain BGSC b98af]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTATGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997