Detailed information NTG0711192

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: NN994_RS01080
• Genome accession: NZ_CP101646
• Coordinates: 186313..187251 (+)
• Length: 312 a.a.
• NCBI ID: WP_011680672.1
• Uniprot ID: A0A0E2Q3C4
• Organism: Streptococcus thermophilus strain UCCSt95
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 181313..192251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NN994_RS01060 (NN994_01060)	-	182978..183990 (+)	1013	Protein_153	peptide ABC transporter substrate-binding protein	-
NN994_RS01065 (NN994_01065)	-	183992..184210 (+)	219	Protein_154	ABC transporter permease subunit	-
NN994_RS01070 (NN994_01070)	-	184221..185255 (+)	1035	Protein_155	ABC transporter permease	-
NN994_RS01075 (NN994_01075)	-	185269..186311 (+)	1043	Protein_156	ABC transporter ATP-binding protein	-
NN994_RS01080 (NN994_01080)	amiF	186313..187251 (+)	939	WP_011680672.1	ABC transporter ATP-binding protein	Regulator
NN994_RS01085 (NN994_01085)	-	187473..187661 (+)	189	WP_011225379.1	hypothetical protein	-
NN994_RS01090 (NN994_01090)	hslO	187808..188674 (+)	867	WP_002949275.1	Hsp33 family molecular chaperone HslO	-
NN994_RS01095 (NN994_01095)	dusB	188667..189644 (+)	978	WP_011680674.1	tRNA dihydrouridine synthase DusB	-
NN994_RS01100 (NN994_01100)	-	189873..191141 (+)	1269	WP_011225384.1	peptidase	-
NN994_RS01105 (NN994_01105)	-	191247..191690 (+)	444	WP_014607905.1	zinc-dependent MarR family transcriptional regulator	-

Sequence

Protein

• Length: 312 a.a.
• Molecular weight: 35353.03 Da
• Isoelectric Point: 6.1917

>NTDB_id=711192 NN994_RS01080 WP_011680672.1 186313..187251(+) (amiF) [Streptococcus thermophilus strain UCCSt95]
MTQERKKLVELKNVSLTFNKGKSNEVEAIDDVSFDIYEGEIFGLVGESGSGKTTIGRFVLKLSDIDSGTVTFSGNEISSL
KGKDLHDFRKIDQMIFQDPQSSLNGRMKIRDIIAEGIDIHKLAKSKEEREAKVKELIDLVGLNEDHLSRYPHEFSGGQRQ
RIGIARALAVNHHFIVADEPISALDVSIQAQVVNLMQKLQHEQGLTYLFIAHDLSIVKYISDRIGAMHWGKLLEVGPADE
IYHNPIHPYTKSLLSAIPEPDPERERKRQHLIYDSSIENDGENRQMYEIRPGHFVYTTVAEAKNYKEEVKSN

Nucleotide

• Length: 939 bp

>NTDB_id=711192 NN994_RS01080 WP_011680672.1 186313..187251(+) (amiF) [Streptococcus thermophilus strain UCCSt95]
ATGACACAAGAACGTAAAAAGTTAGTAGAACTAAAAAATGTGTCTCTAACTTTTAATAAAGGAAAATCAAACGAGGTTGA
GGCTATTGATGACGTTAGCTTTGATATCTATGAGGGCGAAATTTTTGGACTAGTTGGAGAATCTGGATCAGGTAAAACAA
CCATTGGGCGATTTGTTTTAAAACTTTCTGATATTGATTCGGGTACTGTTACCTTTTCAGGTAATGAGATATCAAGTTTA
AAAGGGAAAGATCTTCATGATTTCCGTAAGATAGATCAGATGATCTTTCAAGATCCTCAATCTAGTCTTAATGGACGCAT
GAAAATCCGTGATATTATTGCTGAAGGCATTGATATTCATAAATTGGCTAAATCTAAGGAAGAGCGTGAAGCTAAGGTTA
AAGAACTCATTGATTTGGTAGGGTTAAATGAAGATCACCTATCAAGATATCCCCATGAGTTTTCTGGTGGTCAACGTCAA
AGGATTGGTATTGCGCGTGCTTTAGCGGTTAATCATCATTTTATTGTAGCAGACGAACCGATTTCTGCTTTGGATGTTTC
TATTCAAGCACAAGTGGTTAATTTGATGCAGAAGTTGCAACATGAACAGGGGTTAACTTATTTGTTTATTGCCCATGACC
TATCGATTGTTAAATATATATCCGATCGTATTGGTGCAATGCATTGGGGTAAACTTCTTGAAGTGGGACCAGCAGATGAG
ATCTATCATAACCCGATTCATCCTTATACAAAGAGTCTATTATCTGCAATTCCAGAACCAGATCCAGAAAGAGAGCGTAA
GCGTCAGCATTTGATTTACGATTCCTCTATTGAAAATGATGGGGAAAATAGACAAATGTATGAAATCCGACCAGGGCATT
TTGTTTATACTACAGTAGCAGAGGCTAAAAATTATAAAGAAGAAGTCAAGTCTAATTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

3D structure

• AlphaFold DB: A0A0E2Q3C4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	53.115	97.756	0.519
amiF	Streptococcus thermophilus LMG 18311	52.787	97.756	0.516
amiF	Streptococcus salivarius strain HSISS4	52.459	97.756	0.513