Detailed information
Bioinformatically predicted
Overview
| Name | comQ | Type | Machinery gene |
| Locus tag | K6J64_RS00260 | Genome accession | NZ_AP018775 |
| Coordinates | 55825..56112 (-) | Length | 95 a.a. |
| NCBI ID | WP_005655928.1 | Uniprot ID | A0A0H3PGC3 |
| Organism | Haemophilus influenzae strain CHBN-III-4 isolate 12H35 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 50825..61112
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J64_RS00250 (CHBNIII4_00510) | nrdR | 51910..52359 (-) | 450 | WP_005651549.1 | transcriptional regulator NrdR | - |
| K6J64_RS00255 (CHBNIII4_00520) | recC | 52414..55779 (-) | 3366 | WP_014551001.1 | exodeoxyribonuclease V subunit gamma | - |
| K6J64_RS00260 (CHBNIII4_00530) | comQ | 55825..56112 (-) | 288 | WP_005655928.1 | DUF5374 domain-containing protein | Machinery gene |
| K6J64_RS00265 (CHBNIII4_00540) | comP | 56105..56788 (-) | 684 | WP_005659188.1 | DUF2572 family protein | Machinery gene |
| K6J64_RS00270 (CHBNIII4_00550) | comO | 56803..57519 (-) | 717 | WP_014551003.1 | type II secretion system protein J | Machinery gene |
| K6J64_RS00275 (CHBNIII4_00560) | comN | 57519..58031 (-) | 513 | WP_014551004.1 | type II secretion system protein | Machinery gene |
| K6J64_RS00280 (CHBNIII4_00570) | suhB | 58231..59034 (+) | 804 | WP_014551005.1 | inositol-1-monophosphatase | - |
| K6J64_RS00285 (CHBNIII4_00580) | nrfE | 59144..61051 (+) | 1908 | WP_014551006.1 | heme lyase NrfEFG subunit NrfE | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 11033.81 Da Isoelectric Point: 9.2205
>NTDB_id=71090 K6J64_RS00260 WP_005655928.1 55825..56112(-) (comQ) [Haemophilus influenzae strain CHBN-III-4 isolate 12H35]
MNKGISFITLLFSLTLFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ
MNKGISFITLLFSLTLFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ
Nucleotide
Download Length: 288 bp
>NTDB_id=71090 K6J64_RS00260 WP_005655928.1 55825..56112(-) (comQ) [Haemophilus influenzae strain CHBN-III-4 isolate 12H35]
ATGAATAAAGGAATATCTTTTATTACATTGTTATTTTCTTTAACTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA
ATGAATAAAGGAATATCTTTTATTACATTGTTATTTTCTTTAACTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comQ | Haemophilus influenzae Rd KW20 |
95.789 |
100 |
0.958 |