Detailed information NTG0710838

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NNG64_RS04850
• Genome accession: NZ_CP101610
• Coordinates: 929775..932153 (+)
• Length: 792 a.a.
• NCBI ID: WP_060964667.1
• Uniprot ID: A0AAI8MXR7
• Organism: Bacillus siamensis strain WYJ-E14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 924775..937153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NNG64_RS04825 (NNG64_04820)	-	924861..926126 (-)	1266	WP_060964664.1	replication-associated recombination protein A	-
NNG64_RS04830 (NNG64_04825)	cymR	926321..926737 (+)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
NNG64_RS04835 (NNG64_04830)	-	926757..927896 (+)	1140	WP_060964665.1	cysteine desulfurase family protein	-
NNG64_RS04840 (NNG64_04835)	mnmA	927933..929048 (+)	1116	WP_060964666.1	tRNA 2-thiouridine(34) synthase MnmA	-
NNG64_RS04845 (NNG64_04840)	-	929106..929756 (+)	651	WP_015240287.1	lipopolysaccharide assembly protein LapB	-
NNG64_RS04850 (NNG64_04845)	recD2	929775..932153 (+)	2379	WP_060964667.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NNG64_RS04855 (NNG64_04850)	-	932272..932730 (+)	459	WP_060964668.1	hypothetical protein	-
NNG64_RS04860 (NNG64_04855)	-	932743..932934 (+)	192	WP_003152738.1	hypothetical protein	-
NNG64_RS04865 (NNG64_04860)	-	932956..933087 (+)	132	WP_003152741.1	YrzQ family protein	-
NNG64_RS04870 (NNG64_04865)	-	933122..933778 (-)	657	WP_060964669.1	amino acid ABC transporter permease	-
NNG64_RS04875 (NNG64_04870)	-	933797..934447 (-)	651	WP_060964670.1	amino acid ABC transporter permease	-
NNG64_RS04880 (NNG64_04875)	-	934505..935332 (-)	828	WP_060964671.1	transporter substrate-binding domain-containing protein	-
NNG64_RS04885 (NNG64_04880)	-	935353..936081 (-)	729	WP_060964672.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88293.93 Da
• Isoelectric Point: 4.9490

>NTDB_id=710838 NNG64_RS04850 WP_060964667.1 929775..932153(+) (recD2) [Bacillus siamensis strain WYJ-E14]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILADASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERVKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHFFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSKDIQVLAPMYRGKAGINELNVLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=710838 NNG64_RS04850 WP_060964667.1 929775..932153(+) (recD2) [Bacillus siamensis strain WYJ-E14]
GTGGATCAGCTGAACATCGAGGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTACCACAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACTTACACATTTTACGGAAAAACCGCCACACACCCCAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCATTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACCGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGGCTGATGCATCGGTGCTTT
ATGATGTGCCGAAAATGTCAAAAAAGAAAGCGGACAAACTGGCGGGAGAGCTGCAGCGGCATCAGGGGCTTGAACAGATT
ATGATTTCTCTGAACCAATACGGTTTCGGACCTCAGCTTTCCATGAAAATTTATCAGGCATACGAAACGGAAACCTTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAGGACGTGGAAGGCATCGGTTTTGTTAAAGCCGACGAACTGGGCGGGA
AAATGGGGCTGTCAGGAAACCACCCGGAGCGGGTCAAAGCGGCTATCTTATATACGATTGAATCAACGTGTCTTTCAGAA
GGTCATACGTACATAGAGACAAAGCAGCTGATTATCAATACGCAAACGCTTCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAAATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGACATCGTCATAGAAGGAGAACGCTGCTATT
TTCCGTCTTTGTTTTACGCGGAACAAAACGTCGCAAAACGCGTGCTCGACATTGCGGCCCAGACGGAGTATGCCGATCAG
TTTCCTGAATCGGAATTTCTTCTTGCGCTCGGTGAACTGGAAGAACGGATGAATGTACAATACGCTCCGAGCCAAAAGGA
TGCGATTCAAAAAGCGCTGTCCTCACCGATGCTTTTACTGACCGGGGGACCGGGCACGGGAAAAACGACCGTTATCAAAG
GCATCGTCGAATTGTACAGTGAACTGCACGGAGTATCGCTTGACCCCGGTGATTATAAAAAAGATGAAGCATTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAGCGAATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTCGGCTGGAATGGCGCTGAAGGCTTTACCTACAATGAAGATCAGCCGATTGAAGGGAAACTGATTATTATAGACGAAG
CGAGTATGCTCGATATTTGGCTCGCCAGCCATTTTTTTAAGGCGCTCCCTAAGCACATTCAGCTTATCGTCGTCGGTGAT
GAAGACCAGCTTCCTTCCGTAGGGCCCGGGCAGGTGCTGAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTGCGTCT
GACAGATATTTATCGTCAGGCCGAAGGGTCATCCATCGTTGAACTTGCCCATGATATGAAAAAGGGACTGCTTCCCAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCGTTTATCCGCTGTAATTCTTCACAAATTAAAGAAGTCGTGGATCAAGTCGTC
TCAAATGCGCTAAAAAAGGGGTATACTTCTAAAGACATTCAAGTGCTCGCGCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAACTGAACGTGCTTCTTCAAGACATCATGAATCCGCCGAAAGAAAAAAGGCGGGAGCTGAAATTCGGAGATGTCGTCT
ACAGGACGGGCGATAAAATATTACAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGAGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGGAACGAAATCACCTTTAC
AAAAAAGGATTTCAGCCAGTTTACCCACGCTTACTGCTGTTCCATTCATAAGTCGCAGGGCAGCGAATTTCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTATTATCGAATGCTCAGGAGAAATCTCCTTTATACCGCCATTACAAGAGCCAAAAAATTT
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCACTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTTTACG
ATGCAAATATCGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

• AAA domain (AAA_30) (341-548)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	89.254	99.874	0.891