Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | K6J57_RS00275 | Genome accession | NZ_AP018770 |
| Coordinates | 57783..58295 (-) | Length | 170 a.a. |
| NCBI ID | WP_013526183.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain CHBN-II-7 isolate 13H35 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 52783..63295
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J57_RS00260 (CHBNII7_00520) | comQ | 56089..56376 (-) | 288 | WP_042593720.1 | DUF5374 domain-containing protein | Machinery gene |
| K6J57_RS00265 (CHBNII7_00530) | comP | 56369..57052 (-) | 684 | WP_042593719.1 | DUF2572 family protein | Machinery gene |
| K6J57_RS00270 (CHBNII7_00540) | comO | 57067..57783 (-) | 717 | WP_042593718.1 | type II secretion system protein J | Machinery gene |
| K6J57_RS00275 (CHBNII7_00550) | comN | 57783..58295 (-) | 513 | WP_013526183.1 | type II secretion system protein | Machinery gene |
| K6J57_RS00280 (CHBNII7_00560) | suhB | 58495..59298 (+) | 804 | WP_005664157.1 | inositol-1-monophosphatase | - |
| K6J57_RS00285 (CHBNII7_00570) | nrfE | 59407..61314 (+) | 1908 | WP_042593717.1 | heme lyase NrfEFG subunit NrfE | - |
| K6J57_RS00290 (CHBNII7_00580) | - | 61314..61844 (+) | 531 | WP_005664151.1 | DsbE family thiol:disulfide interchange protein | - |
| K6J57_RS00295 (CHBNII7_00590) | nrfF | 61841..62995 (+) | 1155 | WP_042593716.1 | heme lyase NrfEFG subunit NrfF | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19849.10 Da Isoelectric Point: 8.9743
>NTDB_id=70917 K6J57_RS00275 WP_013526183.1 57783..58295(-) (comN) [Haemophilus influenzae strain CHBN-II-7 isolate 13H35]
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
Nucleotide
Download Length: 513 bp
>NTDB_id=70917 K6J57_RS00275 WP_013526183.1 57783..58295(-) (comN) [Haemophilus influenzae strain CHBN-II-7 isolate 13H35]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACAGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAGCGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACAGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAGCGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
99.412 |
100 |
0.994 |