Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | K6J56_RS08790 | Genome accession | NZ_AP018768 |
| Coordinates | 1789909..1790256 (-) | Length | 115 a.a. |
| NCBI ID | WP_005690826.1 | Uniprot ID | Q4QLQ4 |
| Organism | Haemophilus influenzae strain CHBN-II-5 isolate 13H40 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1784909..1795256
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J56_RS08770 (CHBNII5_16750) | bioB | 1785298..1786299 (-) | 1002 | WP_005655985.1 | biotin synthase BioB | - |
| K6J56_RS08775 (CHBNII5_16760) | thiQ | 1786412..1787059 (-) | 648 | WP_038441405.1 | thiamine ABC transporter ATP-binding protein | - |
| K6J56_RS08780 (CHBNII5_16770) | thiP | 1787043..1788659 (-) | 1617 | WP_011272346.1 | thiamine/thiamine pyrophosphate ABC transporter permease | - |
| K6J56_RS08785 (CHBNII5_16780) | thiB | 1788664..1789662 (-) | 999 | WP_011272345.1 | thiamine ABC transporter substrate binding subunit | - |
| K6J56_RS08790 (CHBNII5_16790) | comE1/comEA | 1789909..1790256 (-) | 348 | WP_005690826.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| K6J56_RS08795 (CHBNII5_16800) | ispH | 1790426..1791370 (-) | 945 | WP_005659294.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| K6J56_RS08800 (CHBNII5_16810) | lspA | 1791367..1791882 (-) | 516 | WP_038441408.1 | signal peptidase II | - |
| K6J56_RS08805 (CHBNII5_16820) | - | 1791952..1793511 (-) | 1560 | WP_038441409.1 | phosphoethanolamine transferase | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12479.38 Da Isoelectric Point: 8.0084
>NTDB_id=70876 K6J56_RS08790 WP_005690826.1 1789909..1790256(-) (comE1/comEA) [Haemophilus influenzae strain CHBN-II-5 isolate 13H40]
MKLMKTLFTSFVLCGSLAAGSTFAEDKVVEQTTQAVVTTQTDSQVAPAMMGDKLNINIATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNVEQLLEVQGIGKATLEKNRDRIIF
MKLMKTLFTSFVLCGSLAAGSTFAEDKVVEQTTQAVVTTQTDSQVAPAMMGDKLNINIATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNVEQLLEVQGIGKATLEKNRDRIIF
Nucleotide
Download Length: 348 bp
>NTDB_id=70876 K6J56_RS08790 WP_005690826.1 1789909..1790256(-) (comE1/comEA) [Haemophilus influenzae strain CHBN-II-5 isolate 13H40]
ATGAAATTAATGAAAACATTATTCACTTCGTTTGTATTGTGTGGGTCACTTGCAGCTGGTTCCACTTTTGCTGAAGACAA
GGTGGTTGAGCAAACAACTCAAGCTGTTGTGACCACTCAAACGGATTCACAAGTAGCACCAGCTATGATGGGAGATAAAT
TGAATATTAACATAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGTAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
ATGAAATTAATGAAAACATTATTCACTTCGTTTGTATTGTGTGGGTCACTTGCAGCTGGTTCCACTTTTGCTGAAGACAA
GGTGGTTGAGCAAACAACTCAAGCTGTTGTGACCACTCAAACGGATTCACAAGTAGCACCAGCTATGATGGGAGATAAAT
TGAATATTAACATAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGTAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
81.25 |
97.391 |
0.791 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
57.944 |
93.043 |
0.539 |
| comEA | Vibrio campbellii strain DS40M4 |
38.393 |
97.391 |
0.374 |