Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | K6J55_RS00275 | Genome accession | NZ_AP018767 |
| Coordinates | 57890..58402 (-) | Length | 170 a.a. |
| NCBI ID | WP_048942825.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain CHBN-II-4 isolate 13H33 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 52890..63402
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J55_RS00260 (CHBNII4_00520) | comQ | 56211..56498 (-) | 288 | WP_048942828.1 | DUF5374 domain-containing protein | Machinery gene |
| K6J55_RS00265 (CHBNII4_00530) | comP | 56491..57174 (-) | 684 | WP_048942827.1 | DUF2572 family protein | Machinery gene |
| K6J55_RS00270 (CHBNII4_00540) | comO | 57171..57890 (-) | 720 | WP_048942826.1 | type II secretion system protein J | Machinery gene |
| K6J55_RS00275 (CHBNII4_00550) | comN | 57890..58402 (-) | 513 | WP_048942825.1 | type II secretion system protein | Machinery gene |
| K6J55_RS00280 (CHBNII4_00560) | suhB | 58602..59405 (+) | 804 | WP_005664157.1 | inositol-1-monophosphatase | - |
| K6J55_RS00285 (CHBNII4_00570) | nrfE | 59514..61421 (+) | 1908 | WP_048942824.1 | heme lyase NrfEFG subunit NrfE | - |
| K6J55_RS00290 (CHBNII4_00580) | - | 61421..61951 (+) | 531 | WP_005688388.1 | DsbE family thiol:disulfide interchange protein | - |
| K6J55_RS00295 (CHBNII4_00590) | nrfF | 61948..63090 (+) | 1143 | WP_005688390.1 | heme lyase NrfEFG subunit NrfF | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19839.06 Da Isoelectric Point: 8.9743
>NTDB_id=70813 K6J55_RS00275 WP_048942825.1 57890..58402(-) (comN) [Haemophilus influenzae strain CHBN-II-4 isolate 13H33]
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCSKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCSKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
Nucleotide
Download Length: 513 bp
>NTDB_id=70813 K6J55_RS00275 WP_048942825.1 57890..58402(-) (comN) [Haemophilus influenzae strain CHBN-II-4 isolate 13H33]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGACAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAACCTTGCGACACAACAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCTCGAAAGAGGTTTATGCGCATTTTTACTATCCTTA
TTTTCCTAATAAAACGATGATTCAAAGCCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCAGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGTAGTATTCGTTTA
AAAACCAATCAATTTGATAGTGCTTGTAATTAA
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGACAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAACCTTGCGACACAACAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCTCGAAAGAGGTTTATGCGCATTTTTACTATCCTTA
TTTTCCTAATAAAACGATGATTCAAAGCCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCAGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGTAGTATTCGTTTA
AAAACCAATCAATTTGATAGTGCTTGTAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
98.824 |
100 |
0.988 |