Detailed information NTG0070718

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: H7679_RS01395
• Genome accession: NZ_AP023392
• Coordinates: 246122..248614 (-)
• Length: 830 a.a.
• NCBI ID: WP_184495894.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DAT300
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 241122..253614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7679_RS01370 (DAT300_02390)	dinB	241751..242818 (+)	1068	WP_014637367.1	DNA polymerase IV	-
H7679_RS01375 (DAT300_02400)	-	242861..243280 (+)	420	WP_024395976.1	Rrf2 family transcriptional regulator	-
H7679_RS01380 (DAT300_02410)	-	243519..244145 (+)	627	WP_014637369.1	NAD(P)-dependent oxidoreductase	-
H7679_RS01385 (DAT300_02420)	-	244250..245170 (+)	921	WP_014637370.1	1-phosphofructokinase family hexose kinase	-
H7679_RS01390 (DAT300_02430)	-	245309..245932 (-)	624	WP_229020546.1	hypothetical protein	-
H7679_RS01395 (DAT300_02440)	recD/recD2/recDB	246122..248614 (-)	2493	WP_184495894.1	ATP-dependent RecD-like DNA helicase	Machinery gene
H7679_RS01400 (DAT300_02450)	lepB	248985..249614 (-)	630	WP_024395179.1	signal peptidase I	-
H7679_RS01405 (DAT300_02460)	rnhC	249624..250514 (-)	891	WP_184495896.1	ribonuclease HIII	-
H7679_RS01410 (DAT300_02470)	-	250599..251582 (+)	984	WP_184495899.1	Gfo/Idh/MocA family protein	-
H7679_RS01415 (DAT300_02480)	-	251931..253169 (+)	1239	WP_024395182.1	LysM peptidoglycan-binding domain-containing protein	-

Sequence

Protein

• Length: 830 a.a.
• Molecular weight: 93318.70 Da
• Isoelectric Point: 4.5487

>NTDB_id=70718 H7679_RS01395 WP_184495894.1 246122..248614(-) (recD/recD2/recDB) [Streptococcus suis strain DAT300]
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERS
KPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEY
GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGFGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRRTELAPAAVAKELTGLIADDKVQQEGTKIFDNSLYFAEHGIHKNLIRLMGKNGFKPFPRADVEAA
IAELETMSSLTYDDIQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRAARRM
NELTGLPSATIHRHLGLVEGQEESYRDDYLEADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQ
ILAPMYRGAAGIDQLNTMTQALLNPLEEGELEFLHNDQAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDE
ITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQEEMAEQDSKEALAEKAESKTATTTQTQPPTQPDRKEQVKVVKENNQQLSLLDQDQPEKTSPEPT
EYILTVDNLLTIDPMIGIEQADIEEFFNLK

Nucleotide

• Length: 2493 bp

>NTDB_id=70718 H7679_RS01395 WP_184495894.1 246122..248614(-) (recD/recD2/recDB) [Streptococcus suis strain DAT300]
ATGAACGAAGTGTATTTTACCGGTACTATTGACCGGATTATTTTTGAAAATCCTAGTAATTTTTATAAAATCCTTCTCCT
TGAAATCGAGGAGACAGACGCAGACTATGATGACTACGAAATTATTGTGACCGGAACGATTGCCGATGTCATTGAAGGAG
AAGACTATCGTTTCTATGGCAATCTGGTCACCCATCCCAAGTATGGTCAGCAACTGCAAATTTCGCGTTACGAACGCAGC
AAGCCTACCTCAGCTGGTCTGGTCAAGTATTTCTCCAGCGAGCATTTCAAGGGAATTGGACGCAAAACAGCTGAAAAAAT
CGTTGAGCTCTATGGCGAAGATACCATTGATAAGATTTTAGCTGAACCTGAAAAACTAACCCAAATCACAGGCCTATCCA
GCAAGAACATGCAGGCATTTGTCGAAAAACTCCGCCTCAATTATGGAACCGAGTTAATCTTGGCAAAACTAGCCGAGTAT
GGCATTCCCAATAAATTGGCCTTTCAAATCCAAGACCAGTATAAGGAAAAAACACTTCAGATTATTGAAGAAAATCCCTA
TCAACTGGTCGAAGATGTCCAGGGGTTCGGCTTTACCATTGCCGATAGGATTGCGGAAAATCTGGGAATTGCCAGTGATT
CACCCCAACGCTTTCGGGCTGGTATGCTCTTTAGCCTCATTCATCGCTCCATGGAAACAGGCGATACCTATGTGGAGGCC
AGAGACTTGCTGGAAGCAACCCTTGAACTGCTGGAAAAATCCCGCCGTACAGAGCTGGCCCCCGCTGCTGTTGCCAAAGA
ATTGACGGGACTGATTGCAGACGACAAGGTACAGCAAGAAGGCACAAAGATTTTTGACAACAGCCTCTACTTTGCCGAAC
ATGGTATCCATAAAAACCTGATCCGCCTGATGGGAAAAAATGGTTTCAAACCCTTCCCACGCGCAGACGTTGAGGCTGCT
ATAGCAGAGCTGGAAACTATGTCTTCCCTGACCTACGATGACATTCAAAAAGAAGCCATCGTCCAAGCCATTACCAATCC
GCTTTTCATTCTGACAGGCGGACCAGGGACTGGTAAAACAACAGTTATCAACGGTATTATCGCGGTCTATGCCATCTTGC
ATAAGATTGATCTGACTCGCAACCGAGAAGAATGCCCAGTCCTCCTAGCCGCTCCAACTGGACGAGCAGCCAGACGGATG
AATGAATTGACAGGGCTGCCTTCTGCCACCATCCACCGCCATCTGGGGCTTGTTGAAGGACAGGAAGAATCCTACCGAGA
TGATTACCTCGAAGCCGACTTCATCATCGTGGATGAGTTTTCTATGGTCGACACTTGGTTGGCAAACCAGCTCTTCCAGA
ACATTTCCTCCCAAACCCAAGTTCTGATTGTCGGCGATGCGGAGCAATTACCTTCTGTCAGTCCCGGTCAGGTCCTTGCT
GACCTCCTGAAAATTGACAAGCTACCCAGCATCACTCTAGAACGTATCTATCGTCAATCCGATGATTCGACTATTGTTAC
CCTAGCCAGCCAGATTCGCCAAGGGGCTCTGCCTAGCGATTTCCGTGAGAAAAAGGCTGACCGCTCCTATTTTGAAGCGC
AAAACGAACAAATTCCAGCCCTGATTGAGCGCATTGTCGGCGCAGCCATCAAGTCGGGCATTCCTGCAAACGAAGTCCAA
ATCCTCGCTCCCATGTACCGTGGGGCCGCAGGCATTGACCAACTCAACACCATGACCCAGGCCCTCCTCAATCCACTGGA
AGAGGGAGAGTTAGAATTCCTCCACAACGATCAAGCCTTCCGCCAAGGTGACCGGGTCATTCATCTAGTCAACGACGCCG
AAGCCAATGTCTTCAATGGTGACTTAGGCTACATCACCGACCTCCTACCTGCCAAATATACGGATTCCAAACAGGATGAA
ATCACCATCAACTTCGACGGTAGCGAAGTCACCTATCCACGCAATGAATGGTACAAGATTACCCTGGCCTATGCCATGTC
CATCCACAAGTCCCAAGGCAGCGAGTTTCAGGTAGTCATCCTTCCCATCACGCGCACCAGCCACCGTATGCTCCAGCGCA
ATCTGGTCTACACCGCCATCACCCGCTCCAAGAGTAAGCTCATCCTCCTGGGCGAAATCTCCGCCTTCGACTACGCCGTC
AAAAACGCCGGAACCGTCCGAAAAACCTATCTGGTCCCACGTTTCCAAGAGGAAATGGCAGAGCAGGATAGCAAGGAAGC
TTTAGCTGAAAAAGCCGAAAGCAAAACAGCTACAACCACGCAAACCCAGCCCCCTACTCAGCCAGACAGAAAAGAACAGG
TTAAAGTAGTCAAAGAAAACAACCAACAACTCTCCCTTCTTGATCAAGACCAGCCAGAAAAAACAAGTCCCGAACCCACA
GAATACATTTTGACTGTAGATAACCTACTAACCATCGACCCCATGATTGGCATAGAACAGGCAGATATTGAAGAATTTTT
TAACCTTAAGTAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (575-645)

• AAA domain (AAA_30) (332-529)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (663-710)

• Helix-hairpin-helix domain (HHH_5) (97-145)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.744	91.205	0.381