Detailed information NTG0706874

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: PF977_RS07120
• Genome accession: NZ_CP116012
• Coordinates: 1396307..1397572 (-)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM124333
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1391307..1402572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PF977_RS07095 (PF977_07095)	yrzK	1391551..1391721 (+)	171	WP_004399157.1	YrzK family protein	-
PF977_RS07100 (PF977_07100)	hisS	1392101..1393375 (+)	1275	WP_014480430.1	histidine--tRNA ligase	-
PF977_RS07105 (PF977_07105)	aspS	1393389..1395167 (+)	1779	WP_015714438.1	aspartate--tRNA ligase	-
PF977_RS07115 (PF977_07115)	tcdA	1395503..1396267 (+)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
PF977_RS07120 (PF977_07120)	rarA	1396307..1397572 (-)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
PF977_RS07125 (PF977_07125)	cymR	1397775..1398191 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
PF977_RS07130 (PF977_07130)	iscSA	1398210..1399349 (+)	1140	WP_064911658.1	cysteine desulfurase family protein	-
PF977_RS07135 (PF977_07135)	mnmA	1399380..1400495 (+)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
PF977_RS07140 (PF977_07140)	yrrB	1400581..1401201 (+)	621	WP_206697897.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=706874 PF977_RS07120 WP_015714437.1 1396307..1397572(-) (rarA) [Bacillus subtilis strain SRCM124333]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=706874 PF977_RS07120 WP_015714437.1 1396307..1397572(-) (rarA) [Bacillus subtilis strain SRCM124333]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATTATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATTTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCACTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998