Detailed information NTG0705445

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NLK52_RS13380
• Genome accession: NZ_CP100436
• Coordinates: 2585606..2588002 (-)
• Length: 798 a.a.
• NCBI ID: WP_014477509.1
• Uniprot ID: A0A8E0VTN8
• Organism: Bacillus subtilis strain MEC_B298
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2580606..2593002

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLK52_RS13345 (NLK52_13345)	glnQ	2581680..2582408 (+)	729	WP_015384232.1	amino acid ABC transporter ATP-binding protein	-
NLK52_RS13350 (NLK52_13350)	glnH	2582430..2583251 (+)	822	WP_015384233.1	glutamine ABC transporter substrate-binding protein GlnH	-
NLK52_RS13355 (NLK52_13355)	glnM	2583312..2583962 (+)	651	WP_015483500.1	amino acid ABC transporter permease	-
NLK52_RS13360 (NLK52_13360)	glnP	2583979..2584635 (+)	657	WP_003229784.1	amino acid ABC transporter permease	-
NLK52_RS13365 (NLK52_13365)	yrzQ	2584670..2584801 (-)	132	WP_003229780.1	YrzQ family protein	-
NLK52_RS13370 (NLK52_13370)	-	2584823..2585014 (-)	192	WP_003225893.1	hypothetical protein	-
NLK52_RS13375 (NLK52_13375)	-	2585026..2585550 (-)	525	WP_080030684.1	hypothetical protein	-
NLK52_RS13380 (NLK52_13380)	recD2	2585606..2588002 (-)	2397	WP_014477509.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NLK52_RS13385 (NLK52_13385)	yrrB	2588027..2588647 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
NLK52_RS13390 (NLK52_13390)	mnmA	2588733..2589848 (-)	1116	WP_015483502.1	tRNA 2-thiouridine(34) synthase MnmA	-
NLK52_RS13395 (NLK52_13395)	iscSA	2589876..2591018 (-)	1143	WP_015384237.1	cysteine desulfurase family protein	-
NLK52_RS13400 (NLK52_13400)	cymR	2591037..2591453 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
NLK52_RS13405 (NLK52_13405)	rarA	2591656..2592921 (+)	1266	WP_015483504.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89182.75 Da
• Isoelectric Point: 5.0708

>NTDB_id=705445 NLK52_RS13380 WP_014477509.1 2585606..2588002(-) (recD2) [Bacillus subtilis strain MEC_B298]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYENQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ

Nucleotide

• Length: 2397 bp

>NTDB_id=705445 NLK52_RS13380 WP_014477509.1 2585606..2588002(-) (recD2) [Bacillus subtilis strain MEC_B298]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAAGAGATACCGACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTATT
CGAGGGAATCGGCAAAAAAACTGCTGAAGAAATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGACG
CTTCAGTGCTTTATGATGTTCCCAGACTCTCAAAAAAGAAAGCCGACACGCTGGCTGGCGCATTGCAGCGGCATCAGGGA
CTGGAGCAAATCATGATTTCCTTGAATCAGTTTGGTTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTTGTGAAGGATGTAGAAGGCATCGGGTTTGGGAAAGCGGATG
AGCTGGGTAGCAGAATGGGTCTTTCGGGTAATCATCCTGAGCGGGTAAAAGCTGCTATTTTGTACACGCTTGAAACGACT
TGTCTGTCAGAGGGGCACACGTACATAGAAACGGAACAGCTGATCATTGACACCCAATCTCTGTTAAACCAGTCAGCAAG
GGAAGGGCAGCGCATCACAGAAATGGATGCCGCTAACGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCATCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGCTAGCCAAACC
GAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCGCGTTGGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCCAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGGCGGTCCGGGAACAGGGAAAA
CGACGGTAATCAGAGGGATTGTCGAGCTCTATGGAGAGCTTCACGGTGTGTCACTAGACCCGTCAGCTTATAAAAAGGAT
GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACGGATGAGTGAATCAACGGGACTCCCTGCAGT
CACGATACACAGGCTGCTTGGCTGGAACGGCGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAAGGGAAGCTGT
TAATTATCGATGAAGCTAGTATGCTTGATATATGGCTGGCGAACCATTTGTTCAAGGCGATCCCTGATCATATACAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGACCTGCTGGCATCCCAGGTGAT
TCCGACTGTGAGACTGACAGACATCTATCGTCAGGCGGAGGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG
GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATTCGCTGCGGAGGCTCGCAAATTAAAGAAGTT
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACGGCAAAGGACATTCAGGTCCTCGCTCCGATGTACAGAGG
AAAAGCCGGCATCAATGAATTGAATGTGATGCTGCAGGACATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAT
ATTGGCGAAATCACGTCGATATTTTATGCAAAGGAAAATACAGAAAAAGAAGACATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATTGCTGTTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCGATTACA
AGAGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAGGCGCTGGAGTGGGGCGTGAAAAATAATGATGCAACTGTCAG
ACAGACCTCCTTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGAAGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTACACGACGCCAACATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	99.875	100	0.999