Detailed information
Bioinformatically predicted
Overview
| Name | comYE | Type | Machinery gene |
| Locus tag | NLY75_RS00760 | Genome accession | NZ_CP100432 |
| Coordinates | 116643..116936 (+) | Length | 97 a.a. |
| NCBI ID | WP_011921722.1 | Uniprot ID | - |
| Organism | Streptococcus suis T15 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 111643..121936
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLY75_RS00730 (NLY75_00730) | - | 112665..113030 (+) | 366 | WP_023369079.1 | DUF1033 family protein | - |
| NLY75_RS00735 (NLY75_00735) | - | 113065..114015 (-) | 951 | WP_023369081.1 | S66 peptidase family protein | - |
| NLY75_RS00740 (NLY75_00740) | comYA | 114101..115051 (+) | 951 | WP_023369082.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NLY75_RS00745 (NLY75_00745) | comYB | 114963..116000 (+) | 1038 | WP_256786938.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NLY75_RS00750 (NLY75_00750) | comYC | 116002..116283 (+) | 282 | WP_011921720.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NLY75_RS00755 (NLY75_00755) | comGD | 116264..116671 (+) | 408 | WP_011921721.1 | competence type IV pilus minor pilin ComGD | - |
| NLY75_RS00760 (NLY75_00760) | comYE | 116643..116936 (+) | 294 | WP_011921722.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| NLY75_RS00765 (NLY75_00765) | comGF/cglF | 116923..117357 (+) | 435 | WP_023369086.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NLY75_RS00770 (NLY75_00770) | comGG | 117335..117745 (+) | 411 | WP_011921724.1 | competence type IV pilus minor pilin ComGG | - |
| NLY75_RS00775 (NLY75_00775) | comYH | 117802..118755 (+) | 954 | WP_011922562.1 | class I SAM-dependent methyltransferase | Machinery gene |
| NLY75_RS00780 (NLY75_00780) | - | 118805..119992 (+) | 1188 | WP_023369088.1 | acetate kinase | - |
| NLY75_RS00785 (NLY75_00785) | - | 120307..120858 (+) | 552 | WP_023369090.1 | folate family ECF transporter S component | - |
Sequence
Protein
Download Length: 97 a.a. Molecular weight: 10817.70 Da Isoelectric Point: 9.8348
>NTDB_id=705298 NLY75_RS00760 WP_011921722.1 116643..116936(+) (comYE) [Streptococcus suis T15]
MVAIRKQKNKAYILLESLVALATLVTICSLILSAVDAGRRRQVWELEQQEVFNLAQMAVQTKQDDLALNGVAVQVQRTAE
RVAVFHEGKEVLSVVKK
MVAIRKQKNKAYILLESLVALATLVTICSLILSAVDAGRRRQVWELEQQEVFNLAQMAVQTKQDDLALNGVAVQVQRTAE
RVAVFHEGKEVLSVVKK
Nucleotide
Download Length: 294 bp
>NTDB_id=705298 NLY75_RS00760 WP_011921722.1 116643..116936(+) (comYE) [Streptococcus suis T15]
GTGGTCGCTATAAGAAAACAGAAGAATAAGGCTTATATTTTGCTAGAAAGTCTGGTTGCCCTTGCGACTCTAGTGACCAT
TTGCAGCTTGATTTTATCAGCTGTGGATGCAGGTCGTAGGCGACAGGTTTGGGAATTGGAACAACAGGAGGTTTTCAACT
TAGCACAGATGGCTGTCCAGACAAAACAAGATGACCTAGCCTTAAACGGAGTTGCAGTTCAGGTTCAACGAACTGCGGAA
AGAGTTGCGGTTTTCCATGAAGGAAAGGAGGTTTTATCGGTTGTTAAAAAGTAA
GTGGTCGCTATAAGAAAACAGAAGAATAAGGCTTATATTTTGCTAGAAAGTCTGGTTGCCCTTGCGACTCTAGTGACCAT
TTGCAGCTTGATTTTATCAGCTGTGGATGCAGGTCGTAGGCGACAGGTTTGGGAATTGGAACAACAGGAGGTTTTCAACT
TAGCACAGATGGCTGTCCAGACAAAACAAGATGACCTAGCCTTAAACGGAGTTGCAGTTCAGGTTCAACGAACTGCGGAA
AGAGTTGCGGTTTTCCATGAAGGAAAGGAGGTTTTATCGGTTGTTAAAAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYE | Streptococcus mutans UA140 |
51.546 |
100 |
0.515 |
| comYE | Streptococcus mutans UA159 |
51.546 |
100 |
0.515 |
| comGE/cglE | Streptococcus pneumoniae Rx1 |
38.043 |
94.845 |
0.361 |
| comGE/cglE | Streptococcus pneumoniae D39 |
38.043 |
94.845 |
0.361 |
| comGE/cglE | Streptococcus pneumoniae R6 |
38.043 |
94.845 |
0.361 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
38.043 |
94.845 |
0.361 |