Detailed information NTG0704155

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: NIK71_RS05845
• Genome accession: NZ_CP100305
• Coordinates: 1220469..1221170 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain KBN10P05679
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1215469..1226170

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIK71_RS05815 (NIK71_05815)	-	1215775..1216218 (-)	444	WP_001246675.1	SRPBCC family protein	-
NIK71_RS05820 (NIK71_05820)	tadA	1216288..1216791 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
NIK71_RS05825 (NIK71_05825)	-	1216798..1217922 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
NIK71_RS05830 (NIK71_05830)	ung	1217919..1218632 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
NIK71_RS05835 (NIK71_05835)	-	1218683..1219279 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
NIK71_RS05840 (NIK71_05840)	gspK	1219510..1220469 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
NIK71_RS05845 (NIK71_05845)	xcpW	1220469..1221170 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
NIK71_RS05850 (NIK71_05850)	xcpV	1221170..1221550 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
NIK71_RS05855 (NIK71_05855)	-	1221540..1222094 (-)	555	WP_000841373.1	type II secretion system protein	-
NIK71_RS05860 (NIK71_05860)	-	1222104..1222712 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
NIK71_RS05865 (NIK71_05865)	-	1222750..1223523 (-)	774	WP_000497298.1	TatD family hydrolase	-
NIK71_RS05870 (NIK71_05870)	-	1223541..1223882 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
NIK71_RS05875 (NIK71_05875)	-	1223894..1224874 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
NIK71_RS05880 (NIK71_05880)	kdsB	1224886..1225647 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=704155 NIK71_RS05845 WP_000594589.1 1220469..1221170(-) (xcpW) [Acinetobacter baumannii strain KBN10P05679]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=704155 NIK71_RS05845 WP_000594589.1 1220469..1221170(-) (xcpW) [Acinetobacter baumannii strain KBN10P05679]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996